RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 GAGE10A6NGK3 116 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 TEX22C9J3V5 150 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 EBAG9O00559 213 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 ACOT8O14734 319 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 PER2O15055 1255 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 SLC25A17O43808 307 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 SLC28A2O43868 658 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 CEP104O60308 925 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 MTA2O94776 668 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 CBSLP0DN79 551 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 PCNAP12004 261 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 CTPS1P17812 591 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 CBSP35520 551 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 PMS2P54278 862 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 SLC18A2Q05940 514 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 FOXD4Q12950 439 aaPredicted RBP2.86□□□□□ -1.95
ATM-220ENST00000533526 LPIN1Q14693 890 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 ZNF284Q2VY69 593 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 FBXO43Q4G163 708 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 LRRTM4Q86VH4 590 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 SPATA2LQ8IUW3 424 aaPredicted RBP2.86□□□□□ -1.95
ATM-220ENST00000533526 CPOQ8IVL8 374 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 DENND6AQ8IWF6 608 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 CLEC18CQ8NCF0 446 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 LSM14AQ8ND56 463 aaKnown RBP2.86□□□□□ -1.95
ATM-220ENST00000533526 MYRIPQ8NFW9 859 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 FAM216AQ8WUB2 273 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 NUDCD2Q8WVJ2 157 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 NEUROG1Q92886 237 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 USP13Q92995 863 aaPredicted RBP2.86□□□□□ -1.95
ATM-220ENST00000533526 MED30Q96HR3 178 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 MAELQ96JY0 434 aaKnown RBP2.86□□□□□ -1.95
ATM-220ENST00000533526 CLSTN3Q9BQT9 956 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 TM6SF1Q9BZW5 370 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 NPFFR1Q9GZQ6 430 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 MROH8Q9H579 483 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 TMEM160Q9NX00 188 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 PPP1R14DQ9NXH3 145 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 IL1RAPL1Q9NZN1 696 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 LUZP4Q9P127 313 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 HCN3Q9P1Z3 774 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 ZNF580Q9UK33 172 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.86□□□□□ -1.95
ATM-220ENST00000533526 SLC45A1Q9Y2W3 748 aa2.86□□□□□ -1.95
ATM-220ENST00000533526 TYW5A2RUC4 315 aaKnown RBP2.85□□□□□ -1.95
ATM-220ENST00000533526 KRTAP29-1A8MX34 341 aaPredicted RBP2.85□□□□□ -1.95
ATM-220ENST00000533526 KDM4EB2RXH2 506 aaPredicted RBP2.85□□□□□ -1.95
ATM-220ENST00000533526 SERPINI2O75830 405 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 ACAA1P09110 424 aaPredicted RBP2.85□□□□□ -1.95
ATM-220ENST00000533526 TFPIP10646 304 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 SLC2A4P14672 509 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 HOXA11P31270 313 aaPredicted RBP2.85□□□□□ -1.95
ATM-220ENST00000533526 DCTDP32321 178 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 TTKP33981 857 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 THPOP40225 353 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 CCR5P51681 352 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 CDH15P55291 814 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 SEC61A1P61619 476 aaKnown RBP2.85□□□□□ -1.95
ATM-220ENST00000533526 CYP4A11Q02928 519 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 TRPC3Q13507 836 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 CAMK1Q14012 370 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 HNF4GQ14541 408 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 SHBQ15464 509 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 ASIC2Q16515 512 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 HLFQ16534 295 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 NFIL3Q16649 462 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 TMEM95Q3KNT9 176 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 KLHL24Q6TFL4 600 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 TADA2BQ86TJ2 420 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 TMTC1Q8IUR5 882 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 CLIP4Q8N3C7 705 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 MIGA1Q8NAN2 632 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 C11orf65Q8NCR3 313 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 ADAMTS15Q8TE58 950 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 GDPD5Q8WTR4 605 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 YME1L1Q96TA2 773 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 SLC25A33Q9BSK2 321 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 MSTO1Q9BUK6 570 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 LMAN2LQ9H0V9 348 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 CD93Q9NPY3 652 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 BEX4Q9NWD9 120 aaPredicted RBP2.85□□□□□ -1.95
ATM-220ENST00000533526 BABAM1Q9NWV8 329 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 NDRG3Q9UGV2 375 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 SLC13A4Q9UKG4 626 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 AGO1Q9UL18 857 aaKnown RBP2.85□□□□□ -1.95
ATM-220ENST00000533526 PAM16Q9Y3D7 125 aa2.85□□□□□ -1.95
ATM-220ENST00000533526 C4orf47A7E2U8 309 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 HOXC11O43248 304 aaPredicted RBP2.84□□□□□ -1.95
ATM-220ENST00000533526 KCNJ13O60928 360 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 FCGR1AP12314 374 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 XBP1P17861 261 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 TNFRSF8P28908 595 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 RYKP34925 604 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 MAPK9P45984 424 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 NR1H2P55055 460 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 HDAC4P56524 1084 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 DSCR9P59020 149 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 CAPSQ13938 189 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 RUNX2Q13950 521 aa2.84□□□□□ -1.95
ATM-220ENST00000533526 KEAP1Q14145 624 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms