RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 IL12RB2Q99665 862 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 C2orf49Q9BVC5 232 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-208ENST00000533123 SLC2A11Q9BYW1 496 aa18.76■□□□□ 0.59
SMPD1-208ENST00000533123 ZC3H7BQ9UGR2 993 aaKnown RBP18.76■□□□□ 0.59
SMPD1-208ENST00000533123 TRIOO75962 3097 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 VCANP13611 3396 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 TCRBV9S1A1TA0A576 114 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 DGKGP49619 791 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 RENBPP51606 427 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 MESP2Q0VG99 397 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 CBLBQ13191 982 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 SLC12A1Q13621 1099 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 NAIF1Q69YI7 327 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-208ENST00000533123 ZNF557Q8N988 423 aaPredicted RBP18.75■□□□□ 0.59
SMPD1-208ENST00000533123 SIGLEC10Q96LC7 697 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 VAT1Q99536 393 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 ACSS3Q9H6R3 686 aa18.75■□□□□ 0.59
SMPD1-208ENST00000533123 XAB2Q9HCS7 855 aaKnown RBP18.75■□□□□ 0.59
SMPD1-208ENST00000533123 CD160O95971 181 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 MT-CO1P00395 513 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 CPP00450 1065 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 ASGR2P07307 311 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 CISD3P0C7P0 127 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 NFKB1P19838 968 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 GJA4P35212 333 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 MDH1P40925 334 aaKnown RBP18.74■□□□□ 0.59
SMPD1-208ENST00000533123 MMP13P45452 471 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 PLK1P53350 603 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 CRADDP78560 199 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 LBRQ14739 615 aaKnown RBP18.74■□□□□ 0.59
SMPD1-208ENST00000533123 GEN1Q17RS7 908 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 FATE1Q969F0 183 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 GBA3Q9H227 469 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 EIF2B3Q9NR50 452 aaKnown RBP18.74■□□□□ 0.59
SMPD1-208ENST00000533123 UBA2Q9UBT2 640 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-208ENST00000533123 MAD1L1Q9Y6D9 718 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 ZNF189O75820 626 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-208ENST00000533123 NEBLO76041 1014 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 HLA-DQB2P05538 268 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 CTSOP43234 321 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-208ENST00000533123 ITPRIPL2Q3MIP1 535 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 TMCO4Q5TGY1 634 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 TMEM215Q68D42 235 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 ADIPOR2Q86V24 386 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 SLC44A3Q8N4M1 653 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 ACDQ96AP0 544 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 MLPHQ9BV36 600 aaPredicted RBP18.74■□□□□ 0.59
SMPD1-208ENST00000533123 RABEP2Q9H5N1 569 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 NT5MQ9NPB1 228 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 TRHDEQ9UKU6 1024 aa18.74■□□□□ 0.59
SMPD1-208ENST00000533123 F5P12259 2224 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 USP12O75317 370 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 GEMIN4P57678 1058 aaKnown RBP18.73■□□□□ 0.59
SMPD1-208ENST00000533123 SESN2P58004 480 aaPredicted RBP18.73■□□□□ 0.59
SMPD1-208ENST00000533123 MAXP61244 160 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 PRPF39Q86UA1 669 aaKnown RBP18.73■□□□□ 0.59
SMPD1-208ENST00000533123 TEX26Q8N6G2 289 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 CHFRQ96EP1 664 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 RPL10LQ96L21 214 aaKnown RBP18.73■□□□□ 0.59
SMPD1-208ENST00000533123 ZNF599Q96NL3 588 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 UBP1Q9NZI7 540 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 DEC1Q9P2X7 70 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 TSHRP16473 764 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 SOX9P48436 509 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 SARNPP82979 210 aaKnown RBP18.73■□□□□ 0.59
SMPD1-208ENST00000533123 CDK16Q00536 496 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 LRRC8BQ6P9F7 803 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 TDRPQ86YL5 185 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 SRRM1Q8IYB3 904 aaKnown RBP18.73■□□□□ 0.59
SMPD1-208ENST00000533123 PAFAH2Q99487 392 aa18.73■□□□□ 0.59
SMPD1-208ENST00000533123 K7ERQ8 282 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 ATP5DP30049 168 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 ITKQ08881 620 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 KBTBD12Q3ZCT8 623 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 RETSATQ6NUM9 610 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 UNC5AQ6ZN44 842 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 KIAA0907Q7Z7F0 614 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-208ENST00000533123 AHI1Q8N157 1196 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 PGBD5Q8N414 524 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMPD1-208ENST00000533123 EBNA1BP2Q99848 306 aaKnown RBP18.72■□□□□ 0.59
SMPD1-208ENST00000533123 COL4A3Q01955 1670 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 TTC24A2A3L6 582 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-208ENST00000533123 MUSKO15146 869 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 CHN1P15882 459 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 MGAT1P26572 445 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 LSP1P33241 339 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 OPRD1P41143 372 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 STK19P49842 368 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-208ENST00000533123 KDSRQ06136 332 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 ZNF235Q14590 738 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 CYTH1Q15438 398 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 KLHL38Q2WGJ6 581 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 MBLAC2Q68D91 279 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 ITPRIPL1Q6GPH6 555 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 TAOK1Q7L7X3 1001 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 RIBC1Q8N443 379 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-208ENST00000533123 OR52K1Q8NGK4 314 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 CSGALNACT1Q8TDX6 532 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 SORCS1Q8WY21 1168 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms