RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SETD7Q8WTS6 366 aaKnown RBP16.9■□□□□ 0.3
PKP3-209ENST00000533069 TEKT4Q8WW24 435 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 ELF4Q99607 663 aaPredicted RBP16.9■□□□□ 0.3
PKP3-209ENST00000533069 CHP1Q99653 195 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 KCNF1Q9H3M0 494 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 ERVMER34-1Q9H9K5 563 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 PDFQ9HBH1 243 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 LCMT1Q9UIC8 334 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 ZKSCAN5Q9Y2L8 839 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 MFHAS1Q9Y4C4 1052 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
PKP3-209ENST00000533069 PI4KAP42356 2102 aa16.9■□□□□ 0.3
PKP3-209ENST00000533069 CNOT1A5YKK6 2376 aaKnown RBP16.89■□□□□ 0.3
PKP3-209ENST00000533069 GOLGA6L9A6NEM1 432 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 SOWAHDA6NJG2 315 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 MYO1FO00160 1098 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 WNT9AO14904 365 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 PRAMEF11O60813 436 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 CBFA2T3O75081 653 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 UGT2B4P06133 528 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 CCDC175P0C221 793 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 IL1R2P27930 398 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 GRK6P43250 576 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 ARRB1P49407 418 aaPredicted RBP16.89■□□□□ 0.29
PKP3-209ENST00000533069 RPS21P63220 83 aaKnown RBP16.89■□□□□ 0.29
PKP3-209ENST00000533069 DPYSQ14117 519 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 ZNF284Q2VY69 593 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 TMEM259Q4ZIN3 620 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 ATXN7L2Q5T6C5 722 aaPredicted RBP16.89■□□□□ 0.29
PKP3-209ENST00000533069 AFMIDQ63HM1 303 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 GDPD4Q6W3E5 623 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 GLRX5Q86SX6 157 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 TMEM145Q8NBT3 493 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 ARHGEF26Q96DR7 871 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 CELF6Q96J87 481 aaKnown RBP16.89■□□□□ 0.29
PKP3-209ENST00000533069 FEM1CQ96JP0 617 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 CAMK1GQ96NX5 476 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 CDC6Q99741 560 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 SLC39A8Q9C0K1 460 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.89■□□□□ 0.29
PKP3-209ENST00000533069 CWC15Q9P013 229 aaKnown RBP16.89■□□□□ 0.29
PKP3-209ENST00000533069 FADS3Q9Y5Q0 445 aa16.89■□□□□ 0.29
PKP3-209ENST00000533069 C16orf96A6NNT2 1141 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 TSPAN6O43657 245 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 HNRNPA2B1P22626 353 aaKnown RBP16.88■□□□□ 0.29
PKP3-209ENST00000533069 AKT2P31751 481 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 GKP32189 559 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 PAPOLAP51003 745 aaKnown RBP16.88■□□□□ 0.29
PKP3-209ENST00000533069 FAM193AP78312 1265 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 FOXC1Q12948 553 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 GRM3Q14832 879 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 SMTNL2Q2TAL5 461 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 BAHD1Q8TBE0 780 aaPredicted RBP16.88■□□□□ 0.29
PKP3-209ENST00000533069 FAM174AQ8TBP5 190 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 ZNF564Q8TBZ8 553 aaPredicted RBP16.88■□□□□ 0.29
PKP3-209ENST00000533069 CTNNBL1Q8WYA6 563 aaPredicted RBP16.88■□□□□ 0.29
PKP3-209ENST00000533069 KCND1Q9NSA2 647 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 UVRAGQ9P2Y5 699 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 LHX3Q9UBR4 397 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 INTUQ9ULD6 942 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 ADAMTS9Q9P2N4 1935 aa16.88■□□□□ 0.29
PKP3-209ENST00000533069 J3KR12 359 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 KCNK3O14649 394 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 SLC31A1O15431 190 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 H2AFZP0C0S5 128 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 RARAP10276 462 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 PRLRP16471 622 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 SUOXP51687 545 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 SLC25A11Q02978 314 aaKnown RBP16.87■□□□□ 0.29
PKP3-209ENST00000533069 RFTN1Q14699 578 aaPredicted RBP16.87■□□□□ 0.29
PKP3-209ENST00000533069 CYTH1Q15438 398 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 HADHQ16836 314 aaKnown RBP16.87■□□□□ 0.29
PKP3-209ENST00000533069 SEL1L3Q68CR1 1132 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 H2AFVQ71UI9 128 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 POLNQ7Z5Q5 900 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 ARHGAP12Q8IWW6 846 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 NPWQ8N729 165 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 HCAR2Q8TDS4 363 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 RHBDD1Q8TEB9 315 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 HSPH1Q92598 858 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 VOPP1Q96AW1 172 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 CALR3Q96L12 384 aaKnown RBP16.87■□□□□ 0.29
PKP3-209ENST00000533069 KLHL32Q96NJ5 620 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 CPEB1Q9BZB8 566 aaKnown RBP16.87■□□□□ 0.29
PKP3-209ENST00000533069 SP110Q9HB58 689 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 CTTNBP2NLQ9P2B4 639 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 DKK3Q9UBP4 350 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 ZFR2Q9UPR6 939 aaKnown RBP16.87■□□□□ 0.29
PKP3-209ENST00000533069 WASF3Q9UPY6 502 aa16.87■□□□□ 0.29
PKP3-209ENST00000533069 CHD5Q8TDI0 1954 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 DFFAO00273 331 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 NEMP1O14524 444 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 TCF4P15884 667 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 ABL2P42684 1182 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 RXRGP48443 463 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 IL10RBQ08334 325 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 TMCO3Q6UWJ1 677 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 RAD9BQ6WBX8 426 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 ZNF662Q6ZS27 426 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 KLHDC7BQ96G42 594 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms