RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RHOAP61586 193 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 RAD51Q06609 339 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 LRRC73Q5JTD7 316 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 DCUN1D2Q6PH85 259 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 GDPD4Q6W3E5 623 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 LRRC69Q6ZNQ3 347 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 RBM43Q6ZSC3 357 aaKnown RBP18.08■□□□□ 0.48
PCF11-206ENST00000533018 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 PARGQ86W56 976 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 NETO2Q8NC67 525 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 ARHGEF26Q96DR7 871 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 IFT43Q96FT9 208 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 GDAP1L1Q96MZ0 367 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 MCEEQ96PE7 176 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 C1QTNF2Q9BXJ5 285 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 OSBPL1AQ9BXW6 950 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 ABCG4Q9H172 646 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 NLGN3Q9NZ94 848 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 A0A087WV48 116 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 SPTY2D1-AS1A0A0U1RR47 76 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 SCAMP1O15126 338 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 TMCC1O94876 653 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 IGSF6O95976 241 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 MT-CO3P00414 261 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 CCDC172P0C7W6 258 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 CKMT1AP12532 417 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 ZNF143P52747 638 aaPredicted RBP18.07■□□□□ 0.48
PCF11-206ENST00000533018 C1QBPQ07021 282 aaKnown RBP18.07■□□□□ 0.48
PCF11-206ENST00000533018 FZD2Q14332 565 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 MON1BQ7L1V2 547 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 RTL3Q8N8U3 475 aaKnown RBP18.07■□□□□ 0.48
PCF11-206ENST00000533018 RFFLQ8WZ73 363 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 APOLD1Q96LR9 279 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 LENG8Q96PV6 779 aaPredicted RBP18.07■□□□□ 0.48
PCF11-206ENST00000533018 EPAS1Q99814 870 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 DUSP23Q9BVJ7 150 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 CATSPERBQ9H7T0 1116 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 EVA1BQ9NVM1 165 aa18.07■□□□□ 0.48
PCF11-206ENST00000533018 FASNP49327 2511 aaKnown RBP18.06■□□□□ 0.48
PCF11-206ENST00000533018 K7ESM1 405 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 RRP8O43159 456 aaKnown RBP18.06■□□□□ 0.48
PCF11-206ENST00000533018 CSF2P04141 144 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 GIMD1P0DJR0 217 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 XPAP23025 273 aaPredicted RBP18.06■□□□□ 0.48
PCF11-206ENST00000533018 DUSP3P51452 185 aaPredicted RBP18.06■□□□□ 0.48
PCF11-206ENST00000533018 THOP1P52888 689 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 RPL7AP62424 266 aaKnown RBP18.06■□□□□ 0.48
PCF11-206ENST00000533018 RTP5Q14D33 572 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 ZNF548Q8NEK5 533 aaPredicted RBP18.06■□□□□ 0.48
PCF11-206ENST00000533018 LMX1AQ8TE12 382 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 CXorf40AQ8TE69 158 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 ERGIC2Q96RQ1 377 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 NCAPGQ9BPX3 1015 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 CNPY3Q9BT09 278 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 TTYH3Q9C0H2 523 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 FZD10Q9ULW2 581 aa18.06■□□□□ 0.48
PCF11-206ENST00000533018 TMCO5BA8MYB1 307 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 RASA4BC9J798 803 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 RASA4O43374 803 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 BRINP1O60477 761 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 MMP20O60882 483 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 FERP16591 822 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 JUNDP17535 347 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 TNFAIP3P21580 790 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 ACAD10Q6JQN1 1059 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 VPS36Q86VN1 386 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 DCBLD1Q8N8Z6 715 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 CASKIN2Q8WXE0 1202 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 BAP1Q92560 729 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 HMCESQ96FZ2 354 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 CRELD1Q96HD1 420 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 KLF6Q99612 283 aaPredicted RBP18.05■□□□□ 0.48
PCF11-206ENST00000533018 KLC2Q9H0B6 622 aa18.05■□□□□ 0.48
PCF11-206ENST00000533018 NOL6Q9H6R4 1146 aaKnown RBP18.05■□□□□ 0.48
PCF11-206ENST00000533018 CPED1A4D0V7 1026 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 LRRC10BA6NIK2 292 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 EIF4E1BA6NMX2 242 aaKnown RBP18.04■□□□□ 0.48
PCF11-206ENST00000533018 AQP9O43315 295 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 TLX3O43711 291 aaPredicted RBP18.04■□□□□ 0.48
PCF11-206ENST00000533018 OPA1O60313 960 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 TM7SF2O76062 418 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 NME1P15531 152 aaKnown RBP18.04■□□□□ 0.48
PCF11-206ENST00000533018 ITPKBP27987 946 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 EIF2S3P41091 472 aaKnown RBP18.04■□□□□ 0.48
PCF11-206ENST00000533018 AIF1P55008 147 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 YBEYP58557 167 aaPredicted RBP18.04■□□□□ 0.48
PCF11-206ENST00000533018 SERINC3Q13530 473 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 PTK2BQ14289 1009 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 CDKN3Q16667 212 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 DEFB133Q30KQ1 61 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 PARP15Q460N3 678 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 INO80DQ53TQ3 878 aaPredicted RBP18.04■□□□□ 0.48
PCF11-206ENST00000533018 CACTIN-AS1Q8N1I8 211 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 AOPEPQ8N6M6 819 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 DENND6BQ8NEG7 585 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 IFI44Q8TCB0 444 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 MAPK15Q8TD08 544 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 ASB12Q8WXK4 309 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 EXOC2Q96KP1 924 aa18.04■□□□□ 0.48
PCF11-206ENST00000533018 WRAP53Q9BUR4 548 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms