RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SQLEQ14534 574 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 PPP1R15BQ5SWA1 713 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 SPATA6LQ8N4H0 392 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 NAT8LQ8N9F0 302 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 MCOLN3Q8TDD5 553 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 TRPC4APQ8TEL6 797 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 TMEM159Q96B96 161 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 EXOC2Q96KP1 924 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 FAM126AQ9BYI3 521 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 TBC1D23Q9NUY8 699 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 PNMA8BQ9ULN7 279 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 SEC22BO75396 215 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 LDLRP01130 860 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 MSH3P20585 1137 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 HTR7P34969 479 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 NEK3P51956 506 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 ATXN1P54253 815 aaKnown RBP15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 CAMK2GQ13555 558 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 SLC24A5Q71RS6 500 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 ADCK1Q86TW2 530 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 BHLHE22Q8NFJ8 381 aaPredicted RBP15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 OR52K2Q8NGK3 314 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 MFSD3Q96ES6 412 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 SLC4A5Q9BY07 1137 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 TXNRD2Q9NNW7 524 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 DYRK1BQ9Y463 629 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 TRIM17Q9Y577 477 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 TULP2O00295 520 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 OR4Q2P0C623 313 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 HNRNPLP14866 589 aaKnown RBP eCLIP15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 KLRC2P26717 231 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 LIMK2P53671 638 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 PLD3Q8IV08 490 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 GPR152Q8TDT2 470 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 BCO2Q9BYV7 579 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 LTBP3Q9NS15 1303 aa15.45■□□□□ 0.06
PCDHA3-202ENST00000532566 GSC2O15499 205 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 COL6A2P12110 1019 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 DGKAP23743 735 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 IL27RAQ6UWB1 636 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 PATL1Q86TB9 770 aaKnown RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TMEM110Q86TL2 294 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TIAM2Q8IVF5 1701 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 BANPQ8N9N5 519 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 CLEC4CQ8WTT0 213 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 PIK3R5Q8WYR1 880 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 RNF208Q9H0X6 261 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 PACSIN3Q9UKS6 424 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 WFS1O76024 890 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TNFAIP8O95379 198 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 ZNF682O95780 498 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 HDCP19113 662 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 LPOP22079 712 aaPredicted RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 CCNCP24863 283 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 CLK1P49759 484 aaKnown RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 PSME3P61289 254 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TAF10Q12962 218 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 USP41Q3LFD5 358 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 ATAD1Q8NBU5 361 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 ZNF558Q96NG5 402 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 NFKBIZQ9BYH8 718 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TM6SF2Q9BZW4 377 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 ASB8Q9H765 288 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 ZMYM5Q9UJ78 669 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 FZD10Q9ULW2 581 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 F8W810 466 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 SCAMP3O14828 347 aaKnown RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 KDM1AO60341 852 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 CPSF4O95639 269 aaKnown RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 ASGR1P07306 291 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 MAPK8P45983 427 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 WDR4P57081 412 aaKnown RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 POLR2LP62875 67 aaKnown RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 OGDHQ02218 1023 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TRAF2Q12933 501 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 DNAJC14Q6Y2X3 702 aaPredicted RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TAC4Q86UU9 113 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 CD101Q93033 1021 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 TRMOQ9BU70 441 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 MYH11P35749 1972 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 YJEFN3A6XGL0 299 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 PLIN3O60664 434 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 AMHP03971 560 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 SCNN1AP37088 669 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 ABL2P42684 1182 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 ZNF467Q7Z7K2 595 aaPredicted RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 PTCD2Q8WV60 388 aaKnown RBP15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 RCN3Q96D15 328 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 IMPAD1Q9NX62 359 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 MYH1P12882 1939 aa15.44■□□□□ 0.06
PCDHA3-202ENST00000532566 STAU1O95793 577 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 ANPEPP15144 967 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 ALOX15P16050 662 aaPredicted RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 TSPAN8P19075 237 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 NUP107P57740 925 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 NAA20P61599 178 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 VAC14Q08AM6 782 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 PPM1JQ5JR12 505 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms