RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 FRMD8P1Q9BZ68 369 aaPredicted RBP22.56■■□□□ 1.2
LRRK1-208ENST00000532029 ATP13A3Q9H7F0 1226 aa22.56■■□□□ 1.2
LRRK1-208ENST00000532029 SNX12Q9UMY4 172 aa22.56■■□□□ 1.2
LRRK1-208ENST00000532029 R3HDM2Q9Y2K5 976 aaKnown RBP22.56■■□□□ 1.2
LRRK1-208ENST00000532029 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.55■■□□□ 1.2
LRRK1-208ENST00000532029 CTAGE9A4FU28 777 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 IGLV3-19P01714 112 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 HLA-DQB2P05538 268 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 CR2P20023 1033 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 SERPINA4P29622 427 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 CD6P30203 668 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 BCL2L1Q07817 233 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 ZNF805Q5CZA5 627 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 CFAP58Q5T655 872 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 NCEH1Q6PIU2 408 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 SLC36A4Q6YBV0 504 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 FAM160A2Q8N612 972 aaPredicted RBP22.55■■□□□ 1.2
LRRK1-208ENST00000532029 ARRDC3Q96B67 414 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 ZNF419Q96HQ0 510 aaPredicted RBP22.55■■□□□ 1.2
LRRK1-208ENST00000532029 KLHL32Q96NJ5 620 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 SEMA3CQ99985 751 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 CEP41Q9BYV8 373 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 BTBD1Q9H0C5 482 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 FZD4Q9ULV1 537 aa22.55■■□□□ 1.2
LRRK1-208ENST00000532029 NDUFS2O75306 463 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 STK10O94804 968 aaKnown RBP22.54■■□□□ 1.2
LRRK1-208ENST00000532029 PIGNO95427 931 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 CES1P23141 567 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 ITGB7P26010 798 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 PTPN3P26045 913 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 RBL1P28749 1068 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 DRD3P35462 400 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 METAP1P53582 386 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 CNTN1Q12860 1018 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 TEX44Q53QW1 395 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.54■■□□□ 1.2
LRRK1-208ENST00000532029 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.54■■□□□ 1.2
LRRK1-208ENST00000532029 FRMD1Q8N878 549 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 TOE1Q96GM8 510 aaKnown RBP22.54■■□□□ 1.2
LRRK1-208ENST00000532029 ZNF641Q96N77 438 aaPredicted RBP22.54■■□□□ 1.2
LRRK1-208ENST00000532029 AGAP3Q96P47 875 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 VAT1Q99536 393 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 NEUROG2Q9H2A3 272 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 C10orf88Q9H8K7 445 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 SGK2Q9HBY8 427 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 KLHL8Q9P2G9 620 aaPredicted RBP22.54■■□□□ 1.2
LRRK1-208ENST00000532029 SERGEFQ9UGK8 458 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 ATP8A1Q9Y2Q0 1164 aa22.54■■□□□ 1.2
LRRK1-208ENST00000532029 TTC24A2A3L6 582 aaPredicted RBP22.53■■□□□ 1.2
LRRK1-208ENST00000532029 BCLAF3A2AJT9 711 aaKnown RBP22.53■■□□□ 1.2
LRRK1-208ENST00000532029 RNF103O00237 685 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 PLK4O00444 970 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 CES2O00748 559 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 KCNN4O15554 427 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 SLC7A4O43246 635 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 GJB3O75712 270 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 TCP1P17987 556 aaKnown RBP22.53■■□□□ 1.2
LRRK1-208ENST00000532029 NEK3P51956 506 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 SIM2Q14190 667 aaPredicted RBP22.53■■□□□ 1.2
LRRK1-208ENST00000532029 FBXL19Q6PCT2 694 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 ERN2Q76MJ5 926 aaKnown RBP22.53■■□□□ 1.2
LRRK1-208ENST00000532029 RASGEF1CQ8N431 466 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 CNTD1Q8N815 330 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 SLC35B2Q8TB61 432 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 NAP1L3Q99457 506 aaPredicted RBP22.53■■□□□ 1.2
LRRK1-208ENST00000532029 HDAC8Q9BY41 377 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 SUV39H2Q9H5I1 410 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 NOD2Q9HC29 1040 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 FAM86C1Q9NVL1 165 aa22.53■■□□□ 1.2
LRRK1-208ENST00000532029 WSB2Q9NYS7 404 aaPredicted RBP22.53■■□□□ 1.2
LRRK1-208ENST00000532029 MBD1Q9UIS9 605 aaPredicted RBP22.53■■□□□ 1.2
LRRK1-208ENST00000532029 C16orf96A6NNT2 1141 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 BCKDHBP21953 392 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 PLA2G5P39877 138 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 DSC2Q02487 901 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 RPL6Q02878 288 aaKnown RBP22.52■■□□□ 1.2
LRRK1-208ENST00000532029 WASHC5Q12768 1159 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 ALG1LQ6GMV1 187 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 PRR23BQ6ZRT6 265 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 PARS2Q7L3T8 475 aaKnown RBP22.52■■□□□ 1.2
LRRK1-208ENST00000532029 CAMK1DQ8IU85 385 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 OR14C36Q8NHC7 312 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 C1orf54Q8WWF1 131 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 ATG4AQ8WYN0 398 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 TEKT5Q96M29 485 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 DKK3Q9UBP4 350 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 DNPEPQ9ULA0 475 aa22.52■■□□□ 1.2
LRRK1-208ENST00000532029 CFAP69A5D8W1 941 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 PGRMC1O00264 195 aaKnown RBP22.51■■□□□ 1.19
LRRK1-208ENST00000532029 LIASO43766 372 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 SERPINF2P08697 491 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 XPAP23025 273 aaPredicted RBP22.51■■□□□ 1.19
LRRK1-208ENST00000532029 CASQ1P31415 396 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 ETF1P62495 437 aaKnown RBP22.51■■□□□ 1.19
LRRK1-208ENST00000532029 ELF2Q15723 593 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 AGBL4Q5VU57 503 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 PAPD7Q5XG87 772 aaKnown RBP22.51■■□□□ 1.19
LRRK1-208ENST00000532029 PID1Q7Z2X4 250 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 HCAR2Q8TDS4 363 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 COG1Q8WTW3 980 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms