RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 FBXL12Q9NXK8 326 aa11.99□□□□□ -0.49
PPFIA1-220ENST00000532024 USP36Q9P275 1121 aaKnown RBP11.99□□□□□ -0.49
PPFIA1-220ENST00000532024 KLHL8Q9P2G9 620 aaPredicted RBP11.99□□□□□ -0.49
PPFIA1-220ENST00000532024 EVLQ9UI08 416 aaPredicted RBP11.99□□□□□ -0.49
PPFIA1-220ENST00000532024 RAB23Q9ULC3 237 aa11.99□□□□□ -0.49
PPFIA1-220ENST00000532024 WASF2Q9Y6W5 498 aa11.99□□□□□ -0.49
PPFIA1-220ENST00000532024 SHROOM3Q8TF72 1996 aa11.99□□□□□ -0.49
PPFIA1-220ENST00000532024 CACNA1HO95180 2353 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 BCLAF3A2AJT9 711 aaKnown RBP11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 H0Y858 1186 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 INSIG1O15503 277 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 KCNN4O15554 427 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 SLC7A4O43246 635 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 SOCS5O75159 536 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 NDUFS2O75306 463 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 IGLV3-19P01714 112 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 UGT2B4P06133 528 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 SERPINF2P08697 491 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 ACTN2P35609 894 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 P2RY2P41231 377 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 SUOXP51687 545 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 NEK3P51956 506 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 POLR2LP62875 67 aaKnown RBP11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 ELF2Q15723 593 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 TEX44Q53QW1 395 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 ZNF805Q5CZA5 627 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 ALG1LQ6GMV1 187 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 FBXL19Q6PCT2 694 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 BRAT1Q6PJG6 821 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 C17orf53Q8N3J3 647 aaPredicted RBP11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 RASGEF1CQ8N431 466 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 HDDC3Q8N4P3 179 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 ZBTB44Q8NCP5 570 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 HCAR2Q8TDS4 363 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 NELL1Q92832 810 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 RAB7BQ96AH8 199 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 LRRC45Q96CN5 670 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 AGAP3Q96P47 875 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 SEMA3CQ99985 751 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 BTBD1Q9H0C5 482 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 SGK2Q9HBY8 427 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 TTC7AQ9ULT0 858 aaPredicted RBP11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 CYP8B1Q9UNU6 501 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 ZNF148Q9UQR1 794 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 SAR1BQ9Y6B6 198 aa11.98□□□□□ -0.49
PPFIA1-220ENST00000532024 A0A1W2PP55 124 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 TCRBV7S2A1N4TA0A589 114 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 GOLGA6CA6NDK9 693 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 GOLGA6BA6NDN3 693 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 LRRC72A6NJI9 287 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 LIASO43766 372 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 OPHN1O60890 802 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 HLA-DQB2P05538 268 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 CTSLP07711 333 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 GOLGA6DP0CG33 693 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 PTPN3P26045 913 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 RBL1P28749 1068 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 CD6P30203 668 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 STIP1P31948 543 aaKnown RBP11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 PAFAH1B1P43034 410 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 MAXP61244 160 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 LMNB2Q03252 620 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 DMWDQ09019 674 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 ZBTB17Q13105 803 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 CCNG2Q16589 344 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 PAPD7Q5XG87 772 aaKnown RBP11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 ERN2Q76MJ5 926 aaKnown RBP11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 FAM124AQ86V42 546 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 NDUFAF2Q8N183 169 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 PRSS33Q8NF86 280 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 SLC35B2Q8TB61 432 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 ACTRT1Q8TDG2 376 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 ATOH1Q92858 354 aaPredicted RBP11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 NKD2Q969F2 451 aaPredicted RBP11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 TEKT5Q96M29 485 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 C16orf45Q96MC5 204 aaPredicted RBP11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 KLHL32Q96NJ5 620 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 FAM118BQ9BPY3 351 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 HDAC8Q9BY41 377 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 PCED1AQ9H1Q7 454 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 SEMA4AQ9H3S1 761 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 SUV39H2Q9H5I1 410 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 GOLGA6AQ9NYA3 693 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 DKK3Q9UBP4 350 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 RNF14Q9UBS8 474 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 SARDHQ9UL12 918 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 TPX2Q9ULW0 747 aaKnown RBP11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 ATP8A1Q9Y2Q0 1164 aa11.97□□□□□ -0.49
PPFIA1-220ENST00000532024 IGHV1OR15-9A0A0B4J2B8 117 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 C16orf96A6NNT2 1141 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 NEMP1O14524 444 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 MUSKO15146 869 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 RHOBTB1O94844 696 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 CR2P20023 1033 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 RGRP47804 291 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 RPL6Q02878 288 aaKnown RBP11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 CNTN1Q12860 1018 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 SIM2Q14190 667 aaPredicted RBP11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 PRPSAP1Q14558 356 aa11.96□□□□□ -0.49
PPFIA1-220ENST00000532024 SLC14A2Q15849 920 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms