RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ASB12Q8WXK4 309 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 HSD3B7Q9H2F3 369 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 NOL6Q9H6R4 1146 aaKnown RBP22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 SCUBE2Q9NQ36 999 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 CLCA2Q9UQC9 943 aa22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 DSPP15924 2871 aaKnown RBP22.6■■□□□ 1.21
TRAPPC4-210ENST00000531290 COL5A1P20908 1838 aaPredicted RBP22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 SPTY2D1-AS1A0A0U1RR47 76 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 RASA4BC9J798 803 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 H3BM21 787 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 SCAMP1O15126 338 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 RASA4O43374 803 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 FZD2Q14332 565 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 PPP1R15BQ5SWA1 713 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 IRF2BP2Q7Z5L9 587 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 PARGQ86W56 976 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 CACTIN-AS1Q8N1I8 211 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 RFFLQ8WZ73 363 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 HMCESQ96FZ2 354 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 VCPIP1Q96JH7 1222 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 DUSP23Q9BVJ7 150 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 NRSN2Q9GZP1 204 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 PARVAQ9NVD7 372 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 EVA1BQ9NVM1 165 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 NLGN3Q9NZ94 848 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 MYO6Q9UM54 1294 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 ITM2BQ9Y287 266 aa22.59■■□□□ 1.21
TRAPPC4-210ENST00000531290 ANKRD11Q6UB99 2663 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 WASH4PA8MWX3 477 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 TMCO5BA8MYB1 307 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 FGF10O15520 208 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 CSF2P04141 144 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 CKMT1AP12532 417 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 INSM1Q01101 510 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 SEMG2Q02383 582 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 PDE1CQ14123 709 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 PDZD3Q86UT5 571 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 UMODL1-AS1Q8N2C9 162 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 DENND6BQ8NEG7 585 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 KLF6Q99612 283 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 KLC2Q9H0B6 622 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 GPR27Q9NS67 375 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 GGT7Q9UJ14 662 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 MFHAS1Q9Y4C4 1052 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 PLXNB3Q9ULL4 1909 aa22.58■■□□□ 1.21
TRAPPC4-210ENST00000531290 SMTNL1A8MU46 457 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 AREL1O15033 823 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 TEX33O43247 280 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 HTR7P34969 479 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 DUSP3P51452 185 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 TPI1P60174 286 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 SERINC3Q13530 473 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 KLHL40Q2TBA0 621 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 ANO6Q4KMQ2 910 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 FILIP1LQ4L180 1135 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 NETO2Q8NC67 525 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 CXorf40AQ8TE69 158 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 DCBLD2Q96PD2 775 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 C1QTNF7Q9BXJ2 289 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 CAAP1Q9H8G2 361 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 TAS2R14Q9NYV8 317 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 LAMA5O15230 3695 aa22.57■■□□□ 1.2
TRAPPC4-210ENST00000531290 ZFYVE26Q68DK2 2539 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 A0A087WV48 116 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 K7ESM1 405 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 MMP20O60882 483 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 MT-CO3P00414 261 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 GIMD1P0DJR0 217 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 NME1P15531 152 aaKnown RBP22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 XPAP23025 273 aaPredicted RBP22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 PSMA2P25787 234 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 MAMLD1Q13495 774 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 PTK2BQ14289 1009 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 RTP5Q14D33 572 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 DCBLD1Q8N8Z6 715 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 FAM181AQ8N9Y4 354 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 BAP1Q92560 729 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 VOPP1Q96AW1 172 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 APOLD1Q96LR9 279 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 NCAPGQ9BPX3 1015 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 USP29Q9HBJ7 922 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 RTN4Q9NQC3 1192 aaKnown RBP22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 DKK3Q9UBP4 350 aa22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 UBA2Q9UBT2 640 aaPredicted RBP22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 NYNRINQ9P2P1 1898 aaKnown RBP22.56■■□□□ 1.2
TRAPPC4-210ENST00000531290 SPINT1O43278 529 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 NEBLO76041 1014 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 TM7SF2O76062 418 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 TIMP2P16035 220 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 JUNDP17535 347 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 THOP1P52888 689 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 PFN3P60673 137 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 OGDHQ02218 1023 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 CYTH1Q15438 398 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 ASIC2Q16515 512 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 LRRC73Q5JTD7 316 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 VPS36Q86VN1 386 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 ZNF548Q8NEK5 533 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 CENPTQ96BT3 561 aa22.55■■□□□ 1.2
TRAPPC4-210ENST00000531290 BPIFA3Q9BQP9 254 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms