RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 EPS8L3Q8TE67 593 aaKnown RBP7.31□□□□□ -1.24
CTNND1-229ENST00000531014 LIN37Q96GY3 246 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-229ENST00000531014 SPATA33Q96N06 139 aa7.31□□□□□ -1.24
CTNND1-229ENST00000531014 TRNT1Q96Q11 434 aaKnown RBP7.31□□□□□ -1.24
CTNND1-229ENST00000531014 TNKS2Q9H2K2 1166 aa7.31□□□□□ -1.24
CTNND1-229ENST00000531014 VPS45Q9NRW7 570 aa7.31□□□□□ -1.24
CTNND1-229ENST00000531014 MTMR10Q9NXD2 777 aa7.31□□□□□ -1.24
CTNND1-229ENST00000531014 SLC24A2Q9UI40 661 aa7.31□□□□□ -1.24
CTNND1-229ENST00000531014 NEDD4P46934 1319 aa7.31□□□□□ -1.24
CTNND1-229ENST00000531014 CST8O60676 142 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 PIGNO95427 931 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 NTRK1P04629 796 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 DBIP07108 87 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 VCLP18206 1134 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 GPD1P21695 349 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 GARTP22102 1010 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 TCF7P36402 384 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 NPTX2P47972 431 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ALDH9A1P49189 494 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 TPTEP56180 551 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ACTR3P61158 418 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MRPS22P82650 360 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CCZ1BP86790 482 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CCZ1P86791 482 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MGAT5Q09328 741 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CBLBQ13191 982 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 WDR59Q6PJI9 974 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ZYG11AQ6WRX3 759 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 RNF44Q7L0R7 432 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 G2E3Q7L622 706 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ATCAYQ86WG3 371 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 FUKQ8N0W3 1084 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 INO80EQ8NBZ0 244 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 OR5T3Q8NGG3 340 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ATXN2LQ8WWM7 1075 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 DIRAS2Q96HU8 199 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MAGEB10Q96LZ2 347 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 RAVER2Q9HCJ3 691 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 VPS51Q9UID3 782 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CEMIPQ8WUJ3 1361 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 B8ZZF3 427 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 AIPO00170 330 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 SLC16A4O15374 487 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 C9P02748 559 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 SERPINE1P05121 402 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 H2AFXP16104 143 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 SDHBP21912 280 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 NR4A1P22736 598 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 UGT1A5P35504 534 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 NAMPTP43490 491 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CDK8P49336 464 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ALDH5A1P51649 535 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MAPK12P53778 367 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 FAM187BQ17R55 369 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 BMT2Q1RMZ1 405 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 KCTD1Q719H9 257 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 SLC26A11Q86WA9 606 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CCDC28AQ8IWP9 274 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MPP5Q8N3R9 675 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 PIGKQ92643 395 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 POP5Q969H6 163 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 OSBP2Q969R2 916 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 PDLIM2Q96JY6 352 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ACOX2Q99424 681 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MRPL4Q9BYD3 311 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 LRRC40Q9H9A6 602 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 TUBG2Q9NRH3 451 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 TMEM216Q9P0N5 145 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 NYAP2Q9P242 653 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ST3GAL5Q9UNP4 418 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 SCAF8Q9UPN6 1271 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 NR2E1Q9Y466 385 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 NUDT7P0C024 238 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ITGA2P17301 1181 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 LHCGRP22888 699 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 PPM1AP35813 382 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MATKP42679 507 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 GLRBP48167 497 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 POLD2P49005 469 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CCR3P51677 355 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CYP4F2P78329 520 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CYP4F3Q08477 520 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ILF2Q12905 390 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MED22Q15528 200 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 FAXCQ5TGI0 409 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 TRAPPC11Q7Z392 1133 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 OAFQ86UD1 273 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CBWD2Q8IUF1 395 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 BHLHE22Q8NFJ8 381 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MAGEC3Q8TD91 643 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 FAM122AQ96E09 287 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CELF4Q9BZC1 486 aaKnown RBP7.3□□□□□ -1.24
CTNND1-229ENST00000531014 KIAA1683Q9H0B3 1180 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 ARMCX1Q9P291 453 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 CKLFQ9UBR5 152 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 A0A1W2PPC1 479 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 MAGEB16A2A368 324 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 SDR42E2A6NKP2 422 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 AGRPO00253 132 aa7.3□□□□□ -1.24
CTNND1-229ENST00000531014 SASH3O75995 380 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms