RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 NPNTQ6UXI9 565 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 GDPD4Q6W3E5 623 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 CCDC50Q8IVM0 306 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 ZCCHC9Q8N567 271 aaKnown RBP12.03□□□□□ -0.48
LTBP3-219ENST00000530990 EXD1Q8NHP7 514 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 DNASE2BQ8WZ79 361 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 HDAC11Q96DB2 347 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 RBM41Q96IZ5 413 aaKnown RBP12.03□□□□□ -0.48
LTBP3-219ENST00000530990 ZNF830Q96NB3 372 aaPredicted RBP12.03□□□□□ -0.48
LTBP3-219ENST00000530990 KLHL32Q96NJ5 620 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 PSKH2Q96QS6 385 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 OSBPL1AQ9BXW6 950 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 MAK16Q9BXY0 300 aaKnown RBP12.03□□□□□ -0.48
LTBP3-219ENST00000530990 HDAC8Q9BY41 377 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 TSGA10Q9BZW7 698 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 MIR1-1HGQ9H1L0 117 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 FSCN3Q9NQT6 498 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 RXFP3Q9NSD7 469 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 GUCA1BQ9UMX6 200 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 PACSIN2Q9UNF0 486 aaPredicted RBP12.03□□□□□ -0.48
LTBP3-219ENST00000530990 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
LTBP3-219ENST00000530990 HEY1Q9Y5J3 304 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
LTBP3-219ENST00000530990 TBC1D3DA0A087WVF3 549 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3IA0A087WXS9 549 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3EA0A087X179 549 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3KA0A087X1G2 549 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 LNP1A1A4G5 178 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TTC24A2A3L6 582 aaPredicted RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 CCDC66A2RUB6 948 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3FA6NER0 549 aaPredicted RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 C16orf96A6NNT2 1141 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3LB9A6J9 549 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 SPINT1O43278 529 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 KRT86O43790 486 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 CST8O60676 142 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 ZRANB2O95218 330 aaKnown RBP eCLIP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 CFIP05156 583 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 CCDC175P0C221 793 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3HP0C7X1 549 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 PECAM1P16284 738 aaPredicted RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 MX2P20592 715 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 MMP13P45452 471 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 CSNK1DP48730 415 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 MAXP61244 160 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 ADCY2Q08462 1091 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 PPIDQ08752 370 aaKnown RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 PPP2R5EQ16537 467 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TFDP3Q5H9I0 405 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 LRRC73Q5JTD7 316 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 MARC1Q5VT66 337 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3GQ6DHY5 549 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3CQ6IPX1 549 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TIGD7Q6NT04 549 aaPredicted RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 FBXL19Q6PCT2 694 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 PEX26Q7Z412 305 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 SRLQ86TD4 932 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 RCOR2Q8IZ40 523 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 TBC1D3Q8IZP1 549 aaPredicted RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 GPR161Q8N6U8 529 aaKnown RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 C12orf50Q8NA57 414 aaPredicted RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 NSMCE1Q8WV22 266 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 MAML1Q92585 1016 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 ALG3Q92685 438 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 NSMCE3Q96MG7 304 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 OLFM3Q96PB7 478 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 LGMNQ99538 433 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 MGME1Q9BQP7 344 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 ORAI3Q9BRQ5 295 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 CPEB1Q9BZB8 566 aaKnown RBP12.02□□□□□ -0.49
LTBP3-219ENST00000530990 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 EBF2Q9HAK2 575 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 PREBQ9HCU5 417 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 ITM2BQ9Y287 266 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 PCDHA3Q9Y5H8 950 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 LAMA1P25391 3075 aa12.02□□□□□ -0.49
LTBP3-219ENST00000530990 KHNYNO15037 678 aaKnown RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 MATN3O15232 486 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 BCAT2O15382 392 aaPredicted RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 LATO43561 262 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 NRDCO43847 1150 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 GDF9O60383 454 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 RNGTTO60942 597 aaKnown RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 ZFXP17010 805 aaPredicted RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CR2P20023 1033 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CCNCP24863 283 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CD27P26842 260 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 MAT2AP31153 395 aaKnown RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 HSPA9P38646 679 aaKnown RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 ID4P47928 161 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 PEX5P50542 639 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 SCNN1BP51168 640 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 RENBPP51606 427 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CCR5P51681 352 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 RWDD2BP57060 319 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 AP1S1P61966 158 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 IRX4P78413 519 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 LMNB2Q03252 620 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 NSUN2Q08J23 767 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms