RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 DCDC1P59894 354 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 CENPCQ03188 943 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 CSHL1Q14406 222 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 TIGD3Q6B0B8 471 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 TPGS1Q6ZTW0 290 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 FBXW8Q8N3Y1 598 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 FXYD6Q9H0Q3 95 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 NDOR1Q9UHB4 597 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 DAGLAQ9Y4D2 1042 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 POLR1CO15160 346 aaPredicted RBP12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 CCNYL3P0C7X3 344 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 SYCE2Q6PIF2 218 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 TMC7Q7Z402 723 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 C3orf58Q8NDZ4 430 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 TMCO6Q96DC7 493 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 AAR2Q9Y312 384 aaKnown RBP12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZNF705FA8MVS1 300 aaPredicted RBP12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 FARS2O95363 451 aaKnown RBP12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZNF705DP0CH99 300 aaPredicted RBP12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZNF705BP0CI00 300 aaPredicted RBP12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 GRIA1P42261 906 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 CLCN2P51788 898 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 CTSWP56202 376 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 WHRNQ9P202 907 aa12.77□□□□□ -0.37
PDE4DIP-227ENST00000529945 LCHNA4D1U4 455 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 PDCD5O14737 125 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 YES1P07947 543 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 SATL1Q86VE3 508 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 POLR3FQ9H1D9 316 aaPredicted RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 PTBP2Q9UKA9 531 aaKnown RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 AP5Z1O43299 807 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 AKR1C8PQ5T2L2 129 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 AHCYL2Q96HN2 611 aaKnown RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 HSPA12BQ96MM6 686 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZNF560Q96MR9 790 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ANGPT4Q9Y264 503 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 CARD16Q5EG05 197 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 TBC1D15Q8TC07 691 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 TREX2Q9BQ50 279 aaPredicted RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 BRD7Q9NPI1 651 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ABCD2Q9UBJ2 740 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 CORO2BQ9UQ03 480 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 IFNA10P01566 189 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 OGNP20774 298 aaKnown RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 DCKP27707 260 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 GNALP38405 381 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZNF792Q3KQV3 632 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 PHTF2Q8N3S3 785 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 FBXO36Q8NEA4 188 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 STK35Q8TDR2 534 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 HERC2P3Q9BVR0 1158 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 RNPEPL1Q9HAU8 725 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 KNL1Q8NG31 2342 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 PLK4O00444 970 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZCCHC12Q6PEW1 402 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZNF782Q6ZMW2 699 aaPredicted RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 KAT5Q92993 513 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 VPS25Q9BRG1 176 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 UBQLN2Q9UHD9 624 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZNF223Q9UK11 482 aaPredicted RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 SCAF8Q9UPN6 1271 aaKnown RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ATMINO43313 823 aaPredicted RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 NRP2O60462 931 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 SH3BGRLO75368 114 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 RASGRP1O95267 797 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 HUNKP57058 714 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 GCNT7Q6ZNI0 430 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 CLIP4Q8N3C7 705 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 CLIP3Q96DZ5 547 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 SLC47A1Q96FL8 570 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 SNTG1Q9NSN8 517 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 TMEM216Q9P0N5 145 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 FKBP7Q9Y680 259 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 YTHDC2Q9H6S0 1430 aaKnown RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 PNMA6FA0A0J9YX94 578 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 IFNGP01579 166 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 ZNF35P13682 527 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 CYP2A7P20853 494 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 SCNN1BP51168 640 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 SLC7A2P52569 658 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 PPP3R1P63098 170 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 NKX6-1P78426 367 aaPredicted RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 AADATQ8N5Z0 425 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 OR8K3Q8NH51 312 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 HNRNPLLQ8WVV9 542 aaKnown RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 TCTEX1D2Q8WW35 142 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 GIMAP5Q96F15 307 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 TSNAXQ99598 290 aaKnown RBP12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 STK36Q9NRP7 1315 aa12.76□□□□□ -0.37
PDE4DIP-227ENST00000529945 RAD51DO75771 328 aa12.75□□□□□ -0.37
PDE4DIP-227ENST00000529945 HOXC9P31274 260 aa12.75□□□□□ -0.37
PDE4DIP-227ENST00000529945 PON2Q15165 354 aa12.75□□□□□ -0.37
PDE4DIP-227ENST00000529945 EZH2Q15910 746 aaKnown RBP12.75□□□□□ -0.37
PDE4DIP-227ENST00000529945 ALG10BQ5I7T1 473 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms