RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 PCDH8O95206 1070 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 IGSF6O95976 241 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 CAPNS1P04632 268 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 GYPCP04921 128 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 C1SP09871 688 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 CDK4P11802 303 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 SPINK2P20155 84 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 CSNK1DP48730 415 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 DNA2P51530 1060 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 FGL2Q14314 439 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 PIGHQ14442 188 aaPredicted RBP12.23□□□□□ -0.45
COPB1-206ENST00000529210 DPYSL2Q16555 572 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 CA9Q16790 459 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 KYAT3Q6YP21 454 aaKnown RBP12.23□□□□□ -0.45
COPB1-206ENST00000529210 GCNT7Q6ZNI0 430 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 RFX8Q6ZV50 586 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 TMPRSS7Q7RTY8 843 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 DNAAF5Q86Y56 855 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 ARHGAP12Q8IWW6 846 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 DENND6BQ8NEG7 585 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 KLHDC7BQ96G42 594 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 KCTD15Q96SI1 283 aaPredicted RBP12.23□□□□□ -0.45
COPB1-206ENST00000529210 KLF6Q99612 283 aaPredicted RBP12.23□□□□□ -0.45
COPB1-206ENST00000529210 SLC17A9Q9BYT1 436 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 DHX35Q9H5Z1 703 aaKnown RBP12.23□□□□□ -0.45
COPB1-206ENST00000529210 KLHL11Q9NVR0 708 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 LHX3Q9UBR4 397 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 NENFQ9UMX5 172 aa12.23□□□□□ -0.45
COPB1-206ENST00000529210 LUC7L2Q9Y383 392 aaKnown RBP12.23□□□□□ -0.45
COPB1-206ENST00000529210 IGF2RP11717 2491 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 TSPAN11A1L157 253 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 ARHGAP42A6NI28 874 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 A6NNZ2 444 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 C1QTNF9BB2RNN3 333 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 SPINT1O43278 529 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 UGT2B4P06133 528 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 ITGAVP06756 1048 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 ATXN1LP0C7T5 689 aaKnown RBP12.22□□□□□ -0.45
COPB1-206ENST00000529210 C1QTNF9P0C862 333 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 THEGLP0DJG4 465 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 ERCC2P18074 760 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 ABL2P42684 1182 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 RHOAP61586 193 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 DPYSQ14117 519 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 RFTN1Q14699 578 aaPredicted RBP12.22□□□□□ -0.45
COPB1-206ENST00000529210 CYTH1Q15438 398 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 SMAD1Q15797 465 aaKnown RBP12.22□□□□□ -0.45
COPB1-206ENST00000529210 BOLA3Q53S33 107 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 TDRD12Q587J7 1177 aaKnown RBP12.22□□□□□ -0.45
COPB1-206ENST00000529210 SEL1L3Q68CR1 1132 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 GDPD4Q6W3E5 623 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 CCNI2Q6ZMN8 369 aaPredicted RBP12.22□□□□□ -0.45
COPB1-206ENST00000529210 TEKT4Q8WW24 435 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 TSC1Q92574 1164 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 GPATCH2LQ9NWQ4 482 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 CWC15Q9P013 229 aaKnown RBP12.22□□□□□ -0.45
COPB1-206ENST00000529210 UBA2Q9UBT2 640 aaPredicted RBP12.22□□□□□ -0.45
COPB1-206ENST00000529210 FTSJ1Q9UET6 329 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 PCSK1NQ9UHG2 260 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.22□□□□□ -0.456e-9■■■■■ 35.4
COPB1-206ENST00000529210 ZFHX4Q86UP3 3567 aa12.22□□□□□ -0.45
COPB1-206ENST00000529210 ZZEF1O43149 2961 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 DMXL2Q8TDJ6 3036 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 A0A087X0T9 212 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 KRIT1O00522 736 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 TOR1BO14657 336 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 CYP1A2P05177 515 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 TPM3P06753 285 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 FAM228BP0C875 321 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 PRLRP16471 622 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 IL1R2P27930 398 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 GKP32189 559 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 RABIFP47224 123 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 IL9RQ01113 521 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 IL10RBQ08334 325 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 NSUN2Q08J23 767 aaKnown RBP eCLIP12.21□□□□□ -0.45
COPB1-206ENST00000529210 BNIP3Q12983 259 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 AGERQ15109 404 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 PRAMEF14Q5SWL7 426 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 ATXN7L2Q5T6C5 722 aaPredicted RBP12.21□□□□□ -0.45
COPB1-206ENST00000529210 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.45
COPB1-206ENST00000529210 POLNQ7Z5Q5 900 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 GATAD2AQ86YP4 633 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 SLC22A18ASQ8N1D0 253 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 GALNT15Q8N3T1 639 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 OR13H1Q8NG92 308 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 OR6K2Q8NGY2 324 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 FAM71BQ8TC56 605 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 BMFQ96LC9 184 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 ZNF641Q96N77 438 aaPredicted RBP12.21□□□□□ -0.45
COPB1-206ENST00000529210 KLHL32Q96NJ5 620 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 SLC39A8Q9C0K1 460 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 THAP2Q9H0W7 228 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 ZWILCHQ9H900 591 aa12.21□□□□□ -0.45
COPB1-206ENST00000529210 IFNKQ9P0W0 207 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms