RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 DSC2Q02487 901 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 MSLNQ13421 630 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 USP10Q14694 798 aaKnown RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 KRT72Q14CN4 511 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 CNGA3Q16281 694 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 PCSK7Q16549 785 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TSNAXIP1Q2TAA8 658 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 MBLAC2Q68D91 279 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 FBXO46Q6PJ61 603 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ASRGL1Q7L266 308 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 DENND1CQ8IV53 801 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ARMC5Q96C12 935 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 VWCEQ96DN2 955 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TMEM237Q96Q45 408 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 PSKH2Q96QS6 385 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 SEMA3CQ99985 751 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TMEM120AQ9BXJ8 343 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 KCNK13Q9HB14 408 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 NMRAL1Q9HBL8 299 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 WBP1LQ9NX94 342 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TMEM216Q9P0N5 145 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 UBA2Q9UBT2 640 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ZNF510Q9Y2H8 683 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ACOT9Q9Y305 439 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ZFP37Q9Y6Q3 630 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 COL4A6Q14031 1691 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 A0A087X1B8 175 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TYW5A2RUC4 315 aaKnown RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 H3BNC9 293 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TRAFD1O14545 582 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 RHOCP08134 193 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 RALBP11234 206 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 FGF3P11487 239 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 NQO1P15559 274 aaKnown RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 STMN1P16949 149 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC6A4P31645 630 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ACVRL1P37023 503 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC1A6P48664 564 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 WDR5P61964 334 aaKnown RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ZBTB16Q05516 673 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TWF1Q12792 350 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 OVGP1Q12889 678 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 GRM3Q14832 879 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 PCLAFQ15004 111 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TBCCQ15814 346 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 RALGPS1Q5JS13 557 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 IL31Q6EBC2 164 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 RAPH1Q70E73 1250 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 RFWD2Q8NHY2 731 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 PIWIL2Q8TC59 973 aaKnown RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TSPAN17Q96FV3 270 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ZNF778Q96MU6 729 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 MGME1Q9BQP7 344 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 MECRQ9BV79 373 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 CINPQ9BW66 212 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ACE2Q9BYF1 805 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 MFSD1Q9H3U5 465 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 IL1RAPL1Q9NZN1 696 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 HEY2Q9UBP5 337 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 GGT7Q9UJ14 662 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 DCTN4Q9UJW0 460 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 FBXO5Q9UKT4 447 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 AGO1Q9UL18 857 aaKnown RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC39A10Q9ULF5 831 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 CORO1CQ9ULV4 474 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 MRPL42Q9Y6G3 142 aaKnown RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 ANAPC1Q9H1A4 1944 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 MYL4P12829 197 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 RAG1P15918 1043 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 LEPRP48357 1165 aaKnown RBP14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 CLCN5P51795 746 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC12A2P55011 1212 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 RAB10P61026 200 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 MAXP61244 160 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 ACVR1Q04771 509 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 NSUN2Q08J23 767 aaKnown RBP eCLIP14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 RIPK1Q13546 671 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 SEPT6Q14141 434 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 PPM1JQ5JR12 505 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 C16orf46Q6P387 395 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 RFWD3Q6PCD5 774 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 CLNKQ7Z7G1 428 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 CMC1Q7Z7K0 106 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 MTDHQ86UE4 582 aaKnown RBP14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 PGBD5Q8N414 524 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC25A41Q8N5S1 370 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 OR6Y1Q8NGX8 325 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 BRSK1Q8TDC3 778 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 THOC1Q96FV9 657 aaKnown RBP14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 TRPC7Q9HCX4 862 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 KLC4Q9NSK0 619 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 LNPEPQ9UIQ6 1025 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 INSL5Q9Y5Q6 135 aa14.91□□□□□ -0.02
ECHDC1-220ENST00000528402 FAM95CA0A1B0GW59 222 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 TRIM13O60858 407 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 LILRB3O75022 631 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 HAUS5O94927 633 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 CRTAMO95727 393 aa14.9□□□□□ -0.02
ECHDC1-220ENST00000528402 NDST3O95803 873 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms