RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 LHX3Q9UBR4 397 aa13.57□□□□□ -0.24
CAPN1-215ENST00000528396 MFHAS1Q9Y4C4 1052 aa13.57□□□□□ -0.24
CAPN1-215ENST00000528396 CHD5Q8TDI0 1954 aa13.57□□□□□ -0.24
CAPN1-215ENST00000528396 CACNA1EQ15878 2313 aa13.57□□□□□ -0.24
CAPN1-215ENST00000528396 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 A0A1W2PQU0 124 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 DCDC2BA2VCK2 349 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 CER1O95813 267 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 SERPINA4P29622 427 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 GRIA4P48058 902 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 LBRQ14739 615 aaKnown RBP13.56□□□□□ -0.24
CAPN1-215ENST00000528396 TCEAL1Q15170 157 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 LRRC38Q5VT99 294 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 ARHGAP36Q6ZRI8 547 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 PARS2Q7L3T8 475 aaKnown RBP13.56□□□□□ -0.24
CAPN1-215ENST00000528396 TTC7BQ86TV6 843 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 TRIM69Q86WT6 500 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 LRRC49Q8IUZ0 686 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 RAB7BQ96AH8 199 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 FAM131CQ96AQ9 280 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 FEM1CQ96JP0 617 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 CALR3Q96L12 384 aaKnown RBP13.56□□□□□ -0.24
CAPN1-215ENST00000528396 SLC6A18Q96N87 628 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 DMTF1Q9Y222 760 aa13.56□□□□□ -0.24
CAPN1-215ENST00000528396 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
CAPN1-215ENST00000528396 KNL1Q8NG31 2342 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 A0A0A6YYK5 440 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-215ENST00000528396 SLC31A1O15431 190 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 MFSD11O43934 449 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 MX2P20592 715 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 COMTP21964 271 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 KDELR1P24390 212 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 IL4RP24394 825 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 CD38P28907 300 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 HSPA9P38646 679 aaKnown RBP13.55□□□□□ -0.24
CAPN1-215ENST00000528396 SCNN1BP51168 640 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 ARSEP51690 589 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 GSDMDP57764 484 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 TAS2R38P59533 333 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 RPS21P63220 83 aaKnown RBP13.55□□□□□ -0.24
CAPN1-215ENST00000528396 SGCGQ13326 291 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 STAT4Q14765 748 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 MARC1Q5VT66 337 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 NAPEPLDQ6IQ20 393 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 KIAA1161Q6NSJ0 714 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 DAAM2Q86T65 1068 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 SRLQ86TD4 932 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 HORMAD1Q86X24 394 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 TSEN2Q8NCE0 465 aaKnown RBP13.55□□□□□ -0.24
CAPN1-215ENST00000528396 PCDH19Q8TAB3 1148 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 RAPGEF5Q92565 580 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 KLK6Q92876 244 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 TUBGCP5Q96RT8 1024 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
CAPN1-215ENST00000528396 ANKRD6Q9Y2G4 727 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 HYOU1Q9Y4L1 999 aa13.55□□□□□ -0.24
CAPN1-215ENST00000528396 PRAMEF26H0Y7S4 382 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 CDX4O14627 284 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-215ENST00000528396 APOL1O14791 398 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 INSIG1O15503 277 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 LATO43561 262 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 PSTPIP1O43586 416 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 TSPAN6O43657 245 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 BUB1BO60566 1050 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-215ENST00000528396 MAGEC1O60732 1142 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 PIGNO95427 931 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 PRLRP16471 622 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 ZFXP17010 805 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-215ENST00000528396 FECHP22830 423 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 AKT2P31751 481 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 MMP13P45452 471 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 SUOXP51687 545 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 HADHBP55084 474 aaKnown RBP13.54□□□□□ -0.24
CAPN1-215ENST00000528396 AP1S1P61966 158 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 BCL2L1Q07817 233 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 ITKQ08881 620 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 SLC10A7Q0GE19 358 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 PAFAH1B3Q15102 231 aaKnown RBP13.54□□□□□ -0.24
CAPN1-215ENST00000528396 KIF19Q2TAC6 998 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 NCBP2-AS2Q69YL0 99 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-215ENST00000528396 C11orf63Q6NUN7 778 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 ERAP2Q6P179 960 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 LAYNQ6UX15 382 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 RAD9BQ6WBX8 426 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 ZSCAN30Q86W11 494 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 RFX6Q8HWS3 928 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 CCDC50Q8IVM0 306 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 TP53INP2Q8IXH6 220 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 CCNYQ8ND76 341 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 OR2I1PQ8NGU4 316 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 C1orf216Q8TAB5 229 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 CXorf40AQ8TE69 158 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 RNF25Q96BH1 459 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-215ENST00000528396 ZNF641Q96N77 438 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-215ENST00000528396 RNF157Q96PX1 679 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 SLC32A1Q9H598 525 aa13.54□□□□□ -0.24
CAPN1-215ENST00000528396 SUV39H2Q9H5I1 410 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms