RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ARL4AP40617 200 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 CSNK1DP48730 415 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 METAP1P53582 386 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 OGDHQ02218 1023 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 NSUN2Q08J23 767 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD7-208ENST00000528280 TRIM14Q14142 442 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 RFTN1Q14699 578 aaPredicted RBP9.75□□□□□ -0.85
CHD7-208ENST00000528280 ZNF284Q2VY69 593 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 HS1BP3Q53T59 392 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 RAB44Q7Z6P3 723 aaPredicted RBP9.75□□□□□ -0.85
CHD7-208ENST00000528280 PDZD3Q86UT5 571 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 PYROXD2Q8N2H3 581 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 GALNT15Q8N3T1 639 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 ARRDC3Q96B67 414 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 ZNF641Q96N77 438 aaPredicted RBP9.75□□□□□ -0.85
CHD7-208ENST00000528280 LENG8Q96PV6 779 aaPredicted RBP9.75□□□□□ -0.85
CHD7-208ENST00000528280 C1QTNF7Q9BXJ2 289 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 SLC17A9Q9BYT1 436 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 MAGEB5Q9BZ81 275 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 ZDHHC6Q9H6R6 413 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 KLHL11Q9NVR0 708 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 IFNKQ9P0W0 207 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 MYO1AQ9UBC5 1043 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 DKK3Q9UBP4 350 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 UBA2Q9UBT2 640 aaPredicted RBP9.75□□□□□ -0.85
CHD7-208ENST00000528280 PCSK1NQ9UHG2 260 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 FADS3Q9Y5Q0 445 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 NEMP2A6NFY4 417 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 C16orf96A6NNT2 1141 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 H3BRJ5 948 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 MYO1FO00160 1098 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 TMCC1O94876 653 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 LDOC1O95751 146 aaPredicted RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 WNT1P04628 370 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 FTH1P19P0C7X4 201 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 XPAP23025 273 aaPredicted RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 HNRNPH3P31942 346 aaKnown RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 RENBPP51606 427 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 RHOAP61586 193 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 PPP2CBP62714 309 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 POLR2LP62875 67 aaKnown RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 PPP2CAP67775 309 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 FAM193AP78312 1265 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 HADHQ16836 314 aaKnown RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 KCNT1Q5JUK3 1230 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 CCDC122Q5T0U0 273 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 HGSNATQ68CP4 663 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 ALKBH5Q6P6C2 394 aaKnown RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 RFX8Q6ZV50 586 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 DNAAF5Q86Y56 855 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 LRRC49Q8IUZ0 686 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 OR8K1Q8NGG5 319 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 BAHD1Q8TBE0 780 aaPredicted RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 SAP25Q8TEE9 199 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 TEKT4Q8WW24 435 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 HMCESQ96FZ2 354 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 TUBGCP5Q96RT8 1024 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 TM6SF2Q9BZW4 377 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 NOL6Q9H6R4 1146 aaKnown RBP9.74□□□□□ -0.85
CHD7-208ENST00000528280 LRRC19Q9H756 370 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 FTSJ1Q9UET6 329 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 NEU3Q9UQ49 428 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 GPSM3Q9Y4H4 160 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 PCDHGA1Q9Y5H4 931 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 SLCO1B1Q9Y6L6 691 aa9.74□□□□□ -0.85
CHD7-208ENST00000528280 TENM4Q6N022 2769 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 A0A1W2PQ67 120 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 A6NNZ2 444 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 FPGTO14772 594 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 WNT9AO14904 365 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 HYAL3O43820 417 aaPredicted RBP9.73□□□□□ -0.85
CHD7-208ENST00000528280 PRAMEF11O60813 436 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 LRCH4O75427 683 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 PALMO75781 387 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 PAK4O96013 591 aaPredicted RBP9.73□□□□□ -0.85
CHD7-208ENST00000528280 CYP1A2P05177 515 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 UGT2B4P06133 528 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 THEGLP0DJG4 465 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 ERCC2P18074 760 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 NFKBIAP25963 317 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 RABIFP47224 123 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 PAPOLAP51003 745 aaKnown RBP9.73□□□□□ -0.85
CHD7-208ENST00000528280 IL10RBQ08334 325 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 ELP6Q0PNE2 266 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 MAPK8IP2Q13387 824 aaPredicted RBP9.73□□□□□ -0.85
CHD7-208ENST00000528280 ILKQ13418 452 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 PTK2BQ14289 1009 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 CYTH1Q15438 398 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 TMEM259Q4ZIN3 620 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 PPP6R3Q5H9R7 873 aaPredicted RBP9.73□□□□□ -0.85
CHD7-208ENST00000528280 CFAP58Q5T655 872 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 SPECC1LQ69YQ0 1117 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 ABI3BPQ7Z7G0 1075 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 BBS5Q8N3I7 341 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 CHCHD4Q8N4Q1 142 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 NIPA2Q8N8Q9 360 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 TMEM145Q8NBT3 493 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 DENND6BQ8NEG7 585 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 NSMCE1Q8WV22 266 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms