RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 ISL2Q96A47 359 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 SEMA3CQ99985 751 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 SPON2Q9BUD6 331 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 C20orf27Q9GZN8 174 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 C11orf49Q9H6J7 331 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 BPTFQ12830 3046 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 HNRNPCL1O60812 293 aaKnown RBP17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 TIMP1P01033 207 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 PROCP04070 461 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 PTPN4P29074 926 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 ELF1P32519 619 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 GNA12Q03113 381 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 STXBP5Q5T5C0 1151 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 TMCO4Q5TGY1 634 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 DNAJB7Q7Z6W7 309 aaPredicted RBP17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 CCDC117Q8IWD4 279 aaPredicted RBP17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 PTCD2Q8WV60 388 aaKnown RBP17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 YME1L1Q96TA2 773 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 ATP13A1Q9HD20 1204 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 VPS45Q9NRW7 570 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 TREX1Q9NSU2 369 aa17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 MARCOQ9UEW3 520 aaPredicted RBP17.48■□□□□ 0.39
PCDHA6-202ENST00000527624 H3BNC9 293 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 DNAJC6O75061 913 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 AHSGP02765 367 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 GLDCP23378 1020 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 HOXD9P28356 352 aaPredicted RBP17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 SERPINH1P50454 418 aaKnown RBP17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 C1QTNF8P60827 252 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 OCRLQ01968 901 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 RAB33AQ14088 237 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 C5orf22Q49AR2 442 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 RABGAP1LQ5R372 815 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 OTOP2Q7RTS6 562 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 DDX53Q86TM3 631 aaKnown RBP17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 TNS4Q8IZW8 715 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 TTC16Q8NEE8 873 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 CYP2S1Q96SQ9 504 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 TMEM120AQ9BXJ8 343 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 PDFQ9HBH1 243 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 TRPC7Q9HCX4 862 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 WBP1LQ9NX94 342 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 NOP53Q9NZM5 478 aaKnown RBP17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 HSFX1Q9UBD0 423 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 AGO1Q9UL18 857 aaKnown RBP17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 C2P06681 752 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 KITP10721 976 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 RAG1P15918 1043 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 SLC1A2P43004 574 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 STX3Q13277 289 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 THOC5Q13769 683 aaKnown RBP17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 PCLAFQ15004 111 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 SIRPB2Q5JXA9 342 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 MBLAC2Q68D91 279 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 ZNF470Q6ECI4 717 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 LONP2Q86WA8 852 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 C10orf107Q8IVU9 208 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 FAM13CQ8NE31 585 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 SKA1Q96BD8 255 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 C7orf26Q96N11 449 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 POLR1EQ9GZS1 481 aaKnown RBP17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 RHOJQ9H4E5 214 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 TLE6Q9H808 572 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 ARNT2Q9HBZ2 717 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 MRM3Q9HC36 420 aaKnown RBP17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 NSMCE4AQ9NXX6 385 aa17.47■□□□□ 0.39
PCDHA6-202ENST00000527624 MYLKQ15746 1914 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 KIAA0100Q14667 2235 aaKnown RBP17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 TEX28O15482 410 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 PHGDHO43175 533 aaKnown RBP17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 SERPINB3P29508 390 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 AVPR1AP37288 418 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 GJA8P48165 433 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 CDH4P55283 916 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 INSCQ1MX18 579 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 RAPH1Q70E73 1250 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 C16orf59Q7L2K0 433 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 TMEM150AQ86TG1 271 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 ARID3BQ8IVW6 561 aaPredicted RBP17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 CMTR2Q8IYT2 770 aaKnown RBP17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 TRMT2BQ96GJ1 504 aaKnown RBP17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 SLC22A12Q96S37 553 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 GPR22Q99680 433 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 MRPL17Q9NRX2 175 aaKnown RBP17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 INSL5Q9Y5Q6 135 aa17.46■□□□□ 0.39
PCDHA6-202ENST00000527624 HEATR9A2RTY3 570 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 CCL22O00626 93 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 SNNO75324 88 aaPredicted RBP17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 LYPLA1O75608 230 aaPredicted RBP17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 HAUS5O94927 633 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 MPOP05164 745 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 MYL2P10916 166 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 FGF3P11487 239 aaPredicted RBP17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 PAMP19021 973 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 TNK2Q07912 1038 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 USP10Q14694 798 aaKnown RBP17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 SLC41A1Q8IVJ1 513 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 CNTN4Q8IWV2 1026 aa17.45■□□□□ 0.38
PCDHA6-202ENST00000527624 TUBB6Q9BUF5 446 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms