RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 CCDC157Q569K6 752 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 LRRC73Q5JTD7 316 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 TPRG1LQ5T0D9 272 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 ERMARDQ5T6L9 678 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 AFMIDQ63HM1 303 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 PPP1R2P3Q6NXS1 205 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 DHRS13Q6UX07 377 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 Q6ZSR6 202 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 ZNF354CQ86Y25 554 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 TP53INP2Q8IXH6 220 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 ZCCHC14Q8WYQ9 949 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 TSC1Q92574 1164 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 ZNF653Q96CK0 615 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 LRIG1Q96JA1 1093 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 FEM1CQ96JP0 617 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 CNDP2Q96KP4 475 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 ISCUQ9H1K1 167 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 DHX35Q9H5Z1 703 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 CATSPERBQ9H7T0 1116 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 GPR27Q9NS67 375 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 KLHL11Q9NVR0 708 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 UCKL1Q9NWZ5 548 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 MYO1AQ9UBC5 1043 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 AP4E1Q9UPM8 1137 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 ACACAQ13085 2346 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 COL5A1P20908 1838 aaPredicted RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ZZEF1O43149 2961 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 TMEM8BA6NDV4 472 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ZSCAN5CA6NGD5 496 aaPredicted RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 EEF2KO00418 725 aaKnown RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 TRIM38O00635 465 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ENC1O14682 589 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 YKT6O15498 198 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 FGF10O15520 208 aaPredicted RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 BUB1BO60566 1050 aaPredicted RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 MAGEC1O60732 1142 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 PRAMEF11O60813 436 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 LRCH4O75427 683 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ERCC2P18074 760 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 IL1R2P27930 398 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 RGRP47804 291 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ACADVLP49748 655 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 PAPOLAP51003 745 aaKnown RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 TPI1P60174 286 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 RHOAP61586 193 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 RPS21P63220 83 aaKnown RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 CAMK2BQ13554 666 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 SMAD1Q15797 465 aaKnown RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 PROX2Q3B8N5 592 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 PARP15Q460N3 678 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ZNF542PQ5EBM4 170 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 KIAA1161Q6NSJ0 714 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 GDPD4Q6W3E5 623 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ARHGAP36Q6ZRI8 547 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 RFX8Q6ZV50 586 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ARHGAP12Q8IWW6 846 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 OXR1Q8N573 874 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 NPWQ8N729 165 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 FNIP1Q8TF40 1166 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 CPLX3Q8WVH0 158 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 CASKIN2Q8WXE0 1202 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 EXOC2Q96KP1 924 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 NSMCE3Q96MG7 304 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 GDAP1L1Q96MZ0 367 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 CWC15Q9P013 229 aaKnown RBP10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 MFHAS1Q9Y4C4 1052 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 HS3ST3A1Q9Y663 406 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 ASPMQ8IZT6 3477 aa10.58□□□□□ -0.72
PRPF40B-204ENST00000527253 A0A1W2PQJ5 194 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 TSPAN6O43657 245 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 SIGLEC6O43699 453 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 MMP20O60882 483 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 PIGNO95427 931 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 DGKAP23743 735 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 HTR7P34969 479 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 NDST2P52849 883 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 UBASH3AP57075 661 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 FZD2Q14332 565 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 INAVAQ3KP66 663 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 TXNRD3NBQ6F5E7 133 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 TTC7BQ86TV6 843 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 ZSWIM9Q86XI8 627 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 ASB12Q8WXK4 309 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 SYN2Q92777 582 aaPredicted RBP10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 RAB7BQ96AH8 199 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 CENPTQ96BT3 561 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 BTBD6Q96KE9 485 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 LENG8Q96PV6 779 aaPredicted RBP10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 CALN1Q9BXU9 219 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 OSBPL1AQ9BXW6 950 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 THAP2Q9H0W7 228 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 UBA2Q9UBT2 640 aaPredicted RBP10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 KLF15Q9UIH9 416 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 RALYQ9UKM9 306 aaKnown RBP10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 CAPN11Q9UMQ6 739 aa10.57□□□□□ -0.72
PRPF40B-204ENST00000527253 A0A087X0T9 212 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 TSPAN11A1L157 253 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 A6NNZ2 444 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 MUSKO15146 869 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 PRPSAP2O60256 369 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms