RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 MANEAQ5SRI9 462 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 OLFML1Q6UWY5 402 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 LRRC31Q6UY01 552 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 C11orf57Q6ZUT1 292 aaPredicted RBP13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 VPS36Q86VN1 386 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 RYBPQ8N488 228 aaPredicted RBP13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 ARL10Q8N8L6 244 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 OR6K2Q8NGY2 324 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 PCDH19Q8TAB3 1148 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 ASB12Q8WXK4 309 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 GSDMAQ96QA5 445 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 SEMA3CQ99985 751 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 CPEB1Q9BZB8 566 aaKnown RBP13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 TM6SF2Q9BZW4 377 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 WDCPQ9H6R7 721 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 ARHGEF38Q9NXL2 777 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 SEPT10Q9P0V9 454 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 ANKMY1Q9P2S6 941 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 HECAQ9UBI9 543 aaPredicted RBP13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 ACTL7AQ9Y615 435 aa13.22□□□□□ -0.29
CLNS1A-207ENST00000527133 A0A1W2PQM1 296 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 DRGXA6NNA5 263 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 NVLO15381 856 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 PPFIA2O75334 1257 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 ZMPSTE24O75844 475 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 ERBB2P04626 1255 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 NTRK1P04629 796 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 TFE3P19532 575 aaPredicted RBP13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 ITIH1P19827 911 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 NOS2P35228 1153 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 USP8P40818 1118 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 ARF5P84085 180 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 PPARDQ03181 441 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 BRMS1LQ5PSV4 323 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 MACC1Q6ZN28 852 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 ZSCAN1Q8NBB4 408 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 RAB7BQ96AH8 199 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 CENPTQ96BT3 561 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 ATP13A1Q9HD20 1204 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 TMPRSS4Q9NRS4 437 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 LOXL2Q9Y4K0 774 aa13.21□□□□□ -0.29
CLNS1A-207ENST00000527133 PRAMEF33A0A0G2JMD5 474 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 ILVBLA1L0T0 632 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 PRAMEF10O60809 474 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SRGAP2O75044 1071 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SMC2O95347 1197 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 WT1P19544 449 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 CCKBRP32239 447 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 EIF4A3P38919 411 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 CXCR3P49682 368 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SULT1E1P49888 294 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 RNASE9P60153 205 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 YPEL5P62699 121 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SLC20A2Q08357 652 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 STIM1Q13586 685 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 ELOCQ15369 112 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 ZNF805Q5CZA5 627 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 LRRC73Q5JTD7 316 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 ISM2Q6H9L7 571 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 GJB7Q6PEY0 223 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SLC26A9Q7LBE3 791 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 ZFAND4Q86XD8 727 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 HID1Q8IV36 788 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 C1orf131Q8NDD1 294 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SCG3Q8WXD2 468 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SMARCE1Q969G3 411 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 TMEM74Q96NL1 305 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 NPY6RQ99463 290 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SCAND2PQ9GZW5 306 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 LRRN3Q9H3W5 708 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SYNCQ9H7C4 482 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 GDPD2Q9HCC8 539 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 MBNL1Q9NR56 388 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 SEPT3Q9UH03 358 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 GPR34Q9UPC5 381 aa13.2□□□□□ -0.3
CLNS1A-207ENST00000527133 UTP20O75691 2785 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 IGLV3-10A0A075B6K4 115 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 BECN2A8MW95 431 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 KRIT1O00522 736 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 MMP20O60882 483 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 UGT2B4P06133 528 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 ALPIP09923 528 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 CTSEP14091 401 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 SLC6A3Q01959 620 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 GNA12Q03113 381 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 DEUP1Q05D60 604 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 ARHGAP44Q17R89 818 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 KLHL10Q6JEL2 608 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 ZNF783Q6ZMS7 281 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 DRC7Q8IY82 874 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 FMR1NBQ8N0W7 255 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 Q8N9G6 341 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 HTR3CQ8WXA8 447 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 TSACCQ96A04 125 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 ARHGEF26Q96DR7 871 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 DHTKD1Q96HY7 919 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1128.1 ms