RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 GKP32189 559 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 FLT3P36888 993 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 ETFBP38117 255 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 MLLT3P42568 568 aaPredicted RBP16.36■□□□□ 0.21
PTPRU-210ENST00000527027 ADKP55263 362 aaKnown RBP16.36■□□□□ 0.21
PTPRU-210ENST00000527027 C1orf61Q13536 156 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 DRAP1Q14919 205 aaPredicted RBP16.36■□□□□ 0.21
PTPRU-210ENST00000527027 PRRT3Q5FWE3 981 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 CCDC81Q6ZN84 652 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 CLEC14AQ86T13 490 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 FAM131BQ86XD5 332 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 SLC35F3Q8IY50 421 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 RBFAQ8N0V3 343 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 ARHGEF26Q96DR7 871 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 TBATAQ96M53 351 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.36■□□□□ 0.21
PTPRU-210ENST00000527027 TCEAL2Q9H3H9 227 aaPredicted RBP16.36■□□□□ 0.21
PTPRU-210ENST00000527027 GGT7Q9UJ14 662 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 TMEM59LQ9UK28 342 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 ITM2BQ9Y287 266 aa16.36■□□□□ 0.21
PTPRU-210ENST00000527027 CCDC187A0A096LP49 1063 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 PMS2P1A4D2B8 440 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 TNFSF15O95150 251 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 POP4O95707 220 aaKnown RBP16.35■□□□□ 0.21
PTPRU-210ENST00000527027 ANXA6P08133 673 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 ACVRL1P37023 503 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
PTPRU-210ENST00000527027 GEMIN4P57678 1058 aaKnown RBP16.35■□□□□ 0.21
PTPRU-210ENST00000527027 YPEL5P62699 121 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 POLD3Q15054 466 aaPredicted RBP16.35■□□□□ 0.21
PTPRU-210ENST00000527027 MYLK3Q32MK0 819 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 C6orf132Q5T0Z8 1188 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 KIAA1614Q5VZ46 1190 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 TRNP1Q6NT89 227 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 PHACTR4Q8IZ21 702 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 OR2AP1Q8NGE2 309 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 OR6K2Q8NGY2 324 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 CFAP57Q96MR6 1250 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 CCDC3Q9BQI4 270 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 SLC13A1Q9BZW2 595 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 RETREG1Q9H6L5 497 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 PADI4Q9UM07 663 aa16.35■□□□□ 0.21
PTPRU-210ENST00000527027 GOLGA8SH3BPF8 625 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 KRIT1O00522 736 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 TOR1BO14657 336 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 AREL1O15033 823 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 YY2O15391 372 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 GSRP00390 522 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 CYP11B1P15538 503 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 SNRPD1P62314 119 aaKnown RBP16.34■□□□□ 0.21
PTPRU-210ENST00000527027 CLN3Q13286 438 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 SPIDRQ14159 915 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 C2CD6Q53TS8 623 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 FAXCQ5TGI0 409 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 ESRP1Q6NXG1 681 aaKnown RBP16.34■□□□□ 0.21
PTPRU-210ENST00000527027 ARCQ7LC44 396 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 TTC7BQ86TV6 843 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 ARHGEF2Q92974 986 aaKnown RBP16.34■□□□□ 0.21
PTPRU-210ENST00000527027 VOPP1Q96AW1 172 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 KLHL32Q96NJ5 620 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 LRRC61Q9BV99 259 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 OSBPL1AQ9BXW6 950 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 CLPBQ9H078 707 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 NDFIP2Q9NV92 336 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.34■□□□□ 0.21
PTPRU-210ENST00000527027 OR12D3Q9UGF7 316 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 PNMA8BQ9ULN7 279 aaPredicted RBP16.34■□□□□ 0.21
PTPRU-210ENST00000527027 HPCAL4Q9UM19 191 aa16.34■□□□□ 0.21
PTPRU-210ENST00000527027 FAM170AA1A519 330 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 NTN3O00634 580 aaPredicted RBP16.33■□□□□ 0.2
PTPRU-210ENST00000527027 CASC3O15234 703 aaKnown RBP16.33■□□□□ 0.2
PTPRU-210ENST00000527027 MMP20O60882 483 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 GADD45BO75293 160 aaPredicted RBP16.33■□□□□ 0.2
PTPRU-210ENST00000527027 UGT2B4P06133 528 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 ITGA2BP08514 1039 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 TSHRP16473 764 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 RHOQP17081 205 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 ADRA1BP35368 520 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 IGFALSP35858 605 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 EIF4A3P38919 411 aaKnown RBP16.33■□□□□ 0.2
PTPRU-210ENST00000527027 MAPKAPK2P49137 400 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 NRG1Q02297 640 aaPredicted RBP16.33■□□□□ 0.2
PTPRU-210ENST00000527027 PPARDQ03181 441 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 ARL13BQ3SXY8 428 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 DPY19L2P1Q6NXN4 242 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 GDPD4Q6W3E5 623 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 MACC1Q6ZN28 852 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 MSANTD4Q8NCY6 345 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 CCNL2Q96S94 520 aaPredicted RBP16.33■□□□□ 0.2
PTPRU-210ENST00000527027 C1QTNF7Q9BXJ2 289 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 MAGEH1Q9H213 219 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 KIAA1468Q9P260 1216 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 DNAI1Q9UI46 699 aa16.33■□□□□ 0.2
PTPRU-210ENST00000527027 TM7SF2O76062 418 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 LSM8O95777 96 aaKnown RBP16.32■□□□□ 0.2
PTPRU-210ENST00000527027 PDX1P52945 283 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 RP1P56715 2156 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 ATP11AP98196 1134 aa16.32■□□□□ 0.2
PTPRU-210ENST00000527027 KCNC4Q03721 635 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms