RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 FAM69BQ5VUD6 431 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 TBC1D9BQ66K14 1250 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 MB21D2Q8IYB1 491 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 OR1N1Q8NGS0 311 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 RASSF8Q8NHQ8 419 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 GRAPLQ8TC17 118 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 FIG4Q92562 907 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 MUL1Q969V5 352 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 C3orf30Q96M34 536 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 RIPOR3Q96MK2 946 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 LRFN5Q96NI6 719 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 KCNS2Q9ULS6 477 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 PCDHGB2Q9Y5G2 931 aa2.78□□□□□ -1.96
ECHDC1-219ENST00000526299 STRNO43815 780 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 GAGE7O76087 117 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 IL1AP01583 271 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 TFRCP02786 760 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 GAGE12FP0CL80 117 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 GAGE12GP0CL81 117 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 GAGE12IP0CL82 117 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 MARK3P27448 753 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 DCTDP32321 178 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 RPS6KA3P51812 740 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 ZNF155Q12901 538 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 GAGE1Q13065 139 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 GAGE4Q13068 117 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 RPS6KA2Q15349 733 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 TMEM30BQ3MIR4 351 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 TRIM60Q495X7 471 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 ATPAF1Q5TC12 328 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 IZUMO3Q5VZ72 239 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 SH2D6Q7Z4S9 175 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 GALNT7Q86SF2 657 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 SATL1Q86VE3 508 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 GATAD2AQ86YP4 633 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 DMBX1Q8NFW5 382 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 ZNF501Q96CX3 271 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 PIGSQ96S52 555 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 RBM4Q9BWF3 364 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 CLPBQ9H078 707 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 UPB1Q9UBR1 384 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 RCE1Q9Y256 329 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 VDAC3Q9Y277 283 aa2.77□□□□□ -1.97
ECHDC1-219ENST00000526299 CGNL1Q0VF96 1302 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 ZNF500O60304 480 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 LINC00271P0C7V0 271 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 MYF6P23409 242 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 ALDH4A1P30038 563 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 NR0B1P51843 470 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 FAM27E3Q08E93 113 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 SREBF2Q12772 1141 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 TNFAIP1Q13829 316 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 SAFBQ15424 915 aaKnown RBP eCLIP2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 KRTAP13-3Q3SY46 172 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 LRRC24Q50LG9 513 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 NAPEPLDQ6IQ20 393 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 SLC9B2Q86UD5 537 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 BRSK2Q8IWQ3 736 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 OR4N2Q8NGD1 307 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 CREB3L4Q8TEY5 395 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 RSC1A1Q92681 617 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 TANKQ92844 425 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 TTC14Q96N46 770 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 STK33Q9BYT3 514 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 CXorf56Q9H5V9 222 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 WDR6Q9NNW5 1121 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 GRHL1Q9NZI5 618 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 NLKQ9UBE8 527 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 SLC9A2Q9UBY0 812 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 SLCO3A1Q9UIG8 710 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 BAG5Q9UL15 447 aa2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 GREB1LQ9C091 1923 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-219ENST00000526299 OR6C68A6NDL8 312 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 ZNF587BE7ETH6 402 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 APAF1O14727 1248 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 PMM2O15305 246 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 SLC25A17O43808 307 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 TIPRLO75663 272 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 PRSS1P07477 247 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 MCM3P25205 808 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 IL15P40933 162 aaPredicted RBP2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 HSD17B4P51659 736 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 DRG2P55039 364 aaKnown RBP2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 IRAK1BP1Q5VVH5 260 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 ARHGAP11AQ6P4F7 1023 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 SYNE3Q6ZMZ3 975 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 CCDC129Q6ZRS4 1044 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 ZC3HC1Q86WB0 502 aaKnown RBP2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 MCPH1Q8NEM0 835 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 LNX1Q8TBB1 728 aaPredicted RBP2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 OTUD7AQ8TE49 926 aaPredicted RBP2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 STYXQ8WUJ0 223 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 F2RL3Q96RI0 385 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 DCTN5Q9BTE1 182 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 MMTAG2Q9BU76 263 aaKnown RBP2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 CERS4Q9HA82 394 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 ZNF224Q9NZL3 707 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 SIX4Q9UIU6 781 aa2.75□□□□□ -1.97
ECHDC1-219ENST00000526299 POU2F3Q9UKI9 436 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms