RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TUBGCP5Q96RT8 1024 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 IL12RB2Q99665 862 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 OSBPL1AQ9BXW6 950 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 HDAC8Q9BY41 377 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 SGK2Q9HBY8 427 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 NT5MQ9NPB1 228 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMPD1-202ENST00000526280 AMACRQ9UHK6 382 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 MYO15AQ9UKN7 3530 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 DMDP11532 3685 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 TCRBV7S2A1N4TA0A589 114 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 HACD1B0YJ81 288 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 PLK4O00444 970 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 SLC7A4O43246 635 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 GJB3O75712 270 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 RHOBTB1O94844 696 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 JCHAINP01591 159 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 UGT2B4P06133 528 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 ITGB7P26010 798 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 MAPK8P45983 427 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 MAXP61244 160 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 AP1S1P61966 158 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 OTUD4Q01804 1114 aaKnown RBP13.09□□□□□ -0.31
SMPD1-202ENST00000526280 CCDC15Q0P6D6 951 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 CNTN1Q12860 1018 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 ZNF805Q5CZA5 627 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 RALGPS1Q5JS13 557 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 AGBL4Q5VU57 503 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 PMS2CLQ68D20 193 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 ALG1LQ6GMV1 187 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 NCEH1Q6PIU2 408 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 GDPD4Q6W3E5 623 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 PRR23BQ6ZRT6 265 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
SMPD1-202ENST00000526280 CNTD1Q8N815 330 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 SUMF1Q8NBK3 374 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 PPP1R16AQ96I34 528 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 NSMCE3Q96MG7 304 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 ZNF641Q96N77 438 aaPredicted RBP13.09□□□□□ -0.31
SMPD1-202ENST00000526280 NUDCD1Q96RS6 583 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 BTBD1Q9H0C5 482 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 DYRK4Q9NR20 520 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 HAUS2Q9NVX0 235 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 ATP8A1Q9Y2Q0 1164 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 GON4LQ3T8J9 2241 aa13.09□□□□□ -0.31
SMPD1-202ENST00000526280 THADAQ6YHU6 1953 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 GPR179Q6PRD1 2367 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 TTC24A2A3L6 582 aaPredicted RBP13.08□□□□□ -0.32
SMPD1-202ENST00000526280 C16orf96A6NNT2 1141 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 ENC1O14682 589 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 MTSS1O43312 755 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 NDUFS2O75306 463 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 NEBLO76041 1014 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 PIGNO95427 931 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 HLA-DQB2P05538 268 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 RPL6Q02878 288 aaKnown RBP13.08□□□□□ -0.32
SMPD1-202ENST00000526280 ZBTB17Q13105 803 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 ELF2Q15723 593 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 SLC45A4Q5BKX6 768 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 PIP5KL1Q5T9C9 394 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 ERN2Q76MJ5 926 aaKnown RBP13.08□□□□□ -0.32
SMPD1-202ENST00000526280 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 SLC13A5Q86YT5 568 aaPredicted RBP13.08□□□□□ -0.32
SMPD1-202ENST00000526280 TMEFF1Q8IYR6 380 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 CADM4Q8NFZ8 388 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 HCAR2Q8TDS4 363 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 KLHL32Q96NJ5 620 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 QKIQ96PU8 341 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMPD1-202ENST00000526280 GPR174Q9BXC1 333 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 POLR1EQ9GZS1 481 aaKnown RBP13.08□□□□□ -0.32
SMPD1-202ENST00000526280 PCED1AQ9H1Q7 454 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 KDM4CQ9H3R0 1056 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 SUV39H2Q9H5I1 410 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 ATP13A3Q9H7F0 1226 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 NOD2Q9HC29 1040 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 DKK3Q9UBP4 350 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 RAB23Q9ULC3 237 aa13.08□□□□□ -0.32
SMPD1-202ENST00000526280 SMG5Q9UPR3 1016 aaKnown RBP13.08□□□□□ -0.32
SMPD1-202ENST00000526280 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.07□□□□□ -0.32
SMPD1-202ENST00000526280 C10orf142B7Z368 130 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 H7C0C1 242 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 PLRG1O43660 514 aaKnown RBP13.07□□□□□ -0.32
SMPD1-202ENST00000526280 SEMA4FO95754 770 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 LMNAP02545 664 aaKnown RBP13.07□□□□□ -0.32
SMPD1-202ENST00000526280 RBP3P10745 1247 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 ADRB3P13945 408 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 CES1P23141 567 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 PTPN3P26045 913 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 SERPINA4P29622 427 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 CXCR5P32302 372 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 ATP5OP48047 213 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 NEK3P51956 506 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 ADPRHP54922 357 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 TAS2R38P59533 333 aa13.07□□□□□ -0.32
SMPD1-202ENST00000526280 EIF3EP60228 445 aaKnown RBP13.07□□□□□ -0.32
SMPD1-202ENST00000526280 BCL2L1Q07817 233 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms