RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 CXCR3P49682 368 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 MXI1P50539 228 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 CLCN5P51795 746 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 GOLGA8FQ08AF8 430 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 FAM27E3Q08E93 113 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 CAPSQ13938 189 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 LPIN1Q14693 890 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 PLCB4Q15147 1175 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 FBXO47Q5MNV8 452 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 C9orf57Q5W0N0 161 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 C16orf82Q7Z2V1 217 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 PATL1Q86TB9 770 aaKnown RBP4.2□□□□□ -1.74
CD44-217ENST00000525348 SPATA5Q8NB90 893 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 TBC1D22AQ8WUA7 517 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 FAM216AQ8WUB2 273 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 HSPH1Q92598 858 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 LMLNQ96KR4 655 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 PHF7Q9BWX1 381 aaPredicted RBP4.2□□□□□ -1.74
CD44-217ENST00000525348 TM6SF1Q9BZW5 370 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 MROH8Q9H579 483 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 OCIAD1Q9NX40 245 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 AGO1Q9UL18 857 aaKnown RBP4.2□□□□□ -1.74
CD44-217ENST00000525348 CNPY2Q9Y2B0 182 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 ADGRF5Q8IZF2 1346 aa4.2□□□□□ -1.74
CD44-217ENST00000525348 IGLV5-52A0A0A0MRZ9 124 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 DYTNA2CJ06 578 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 LINC01553A4QN01 128 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 CHL1O00533 1208 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 ACOT8O14734 319 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 ZBTB11O95625 1053 aaPredicted RBP4.19□□□□□ -1.74
CD44-217ENST00000525348 CHRM4P08173 479 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 ADORA2A-AS1P86434 159 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 EFR3AQ14156 821 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 ANKRD45Q5TZF3 282 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 DLK2Q6UY11 383 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 DNAAF1Q8NEP3 725 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 RAB40AQ8WXH6 277 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 STAMQ92783 540 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 FIZ1Q96SL8 496 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 YME1L1Q96TA2 773 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 REEP2Q9BRK0 252 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 SLC25A33Q9BSK2 321 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 SLC32A1Q9H598 525 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 NOD2Q9HC29 1040 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 SLC45A1Q9Y2W3 748 aa4.19□□□□□ -1.74
CD44-217ENST00000525348 TCF20Q9UGU0 1960 aaKnown RBP4.18□□□□□ -1.74
CD44-217ENST00000525348 CBY3A6NI87 242 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 SH2D7A6NKC9 451 aaPredicted RBP4.18□□□□□ -1.74
CD44-217ENST00000525348 IFITM10A6NMD0 228 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 PER2O15055 1255 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 ANP32CO43423 234 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 KIF1CO43896 1103 aaKnown RBP4.18□□□□□ -1.74
CD44-217ENST00000525348 KCNJ13O60928 360 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 WEE2P0C1S8 567 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 PAPOLAP51003 745 aaKnown RBP4.18□□□□□ -1.74
CD44-217ENST00000525348 ART1P52961 327 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 SEC61A1P61619 476 aaKnown RBP4.18□□□□□ -1.74
CD44-217ENST00000525348 CYP4A11Q02928 519 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 C17orf99Q6UX52 265 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 MOB3CQ70IA8 216 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 CPOQ8IVL8 374 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 DENND6AQ8IWF6 608 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 LSM14AQ8ND56 463 aaKnown RBP4.18□□□□□ -1.74
CD44-217ENST00000525348 GDPD5Q8WTR4 605 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 TMEM170AQ8WVE7 144 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 ISCA1Q9BUE6 129 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 CDT1Q9H211 546 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 C6orf106Q9H6K1 298 aaPredicted RBP4.18□□□□□ -1.74
CD44-217ENST00000525348 PPCSQ9HAB8 311 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 ENTPD7Q9NQZ7 604 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 TMEM51Q9NW97 253 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 PCDHGB1Q9Y5G3 927 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 CECR2Q9BXF3 1484 aa4.18□□□□□ -1.74
CD44-217ENST00000525348 CC2D2AQ9P2K1 1620 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 A0A1B0GUV1 79 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 A0A1B0GVM2 712 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.17□□□□□ -1.74
CD44-217ENST00000525348 EME2A4GXA9 379 aaPredicted RBP4.17□□□□□ -1.74
CD44-217ENST00000525348 PABPN1LA6NDY0 278 aaKnown RBP4.17□□□□□ -1.74
CD44-217ENST00000525348 CEP104O60308 925 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 MCCP23508 829 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 C21orf33P30042 268 aaPredicted RBP4.17□□□□□ -1.74
CD44-217ENST00000525348 CCR5P51681 352 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 SLC12A1Q13621 1099 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 ANKRD1Q15327 319 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 IZUMO4Q1ZYL8 232 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 PLEKHO1Q53GL0 409 aaPredicted RBP4.17□□□□□ -1.74
CD44-217ENST00000525348 NCAPH2Q6IBW4 605 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 CREB3L2Q70SY1 520 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 PRSS45Q7RTY3 260 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 CHD1LQ86WJ1 897 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 MB21D2Q8IYB1 491 aaPredicted RBP4.17□□□□□ -1.74
CD44-217ENST00000525348 ARRDC2Q8TBH0 407 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 CNOT9Q92600 299 aaKnown RBP4.17□□□□□ -1.74
CD44-217ENST00000525348 RNF183Q96D59 192 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 TXNDC15Q96J42 360 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 PYM1Q9BRP8 204 aaKnown RBP4.17□□□□□ -1.74
CD44-217ENST00000525348 EPHX3Q9H6B9 360 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 SCN5AQ14524 2016 aa4.17□□□□□ -1.74
CD44-217ENST00000525348 IFRD1O00458 451 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms