RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PDFQ9HBH1 243 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 PCDH18Q9HCL0 1135 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 DONSONQ9NYP3 566 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 GGT7Q9UJ14 662 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 PCOLCE2Q9UKZ9 415 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 TPX2Q9ULW0 747 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 DMTF1Q9Y222 760 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 ITM2BQ9Y287 266 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 NCOR2Q9Y618 2525 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 A0A1B0GTQ1 180 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 NEMP1O14524 444 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 PIGNO95427 931 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 PAK4O96013 591 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 H2AFZP0C0S5 128 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 RGRP47804 291 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 CCT8P50990 548 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 CLDN2P57739 230 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 NXPH1P58417 271 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 RAD51Q06609 339 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 MMRN1Q13201 1228 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 FGL2Q14314 439 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 KRT81Q14533 505 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 SUZ12Q15022 739 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 SHBQ15464 509 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 H2AFVQ71UI9 128 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 TTC7BQ86TV6 843 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 LRIG1Q96JA1 1093 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 FEM1CQ96JP0 617 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 CNTNAP3BQ96NU0 1288 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 CSPG4P5Q96PW8 444 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 ELF4Q99607 663 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 TRIM5Q9C035 493 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 NHEJ1Q9H9Q4 299 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 SP110Q9HB58 689 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 GDF3Q9NR23 364 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 KLHL11Q9NVR0 708 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 ANGPTL2Q9UKU9 493 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 PCDHGB2Q9Y5G2 931 aa13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-205ENST00000525079 SSU72P8A0A1W2PR75 194 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 IGLON5A6NGN9 336 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 AKR1B15C9JRZ8 316 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 FLRT2O43155 660 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 BUB1BO60566 1050 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 CBFA2T3O75081 653 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 PALMO75781 387 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 CD48P09326 243 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 HNRNPA2B1P22626 353 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 AKT2P31751 481 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 NUDT1P36639 197 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 ZNF135P52742 658 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 CDH6P55285 790 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 TAS2R40P59535 323 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 RPS21P63220 83 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 BNIP3Q12983 259 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 TBX2Q13207 712 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 HADHQ16836 314 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 TMEM259Q4ZIN3 620 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 TMCO3Q6UWJ1 677 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 DBX2Q6ZNG2 339 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 PNPLA1Q8N8W4 532 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 TSEN2Q8NCE0 465 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 TEKT4Q8WW24 435 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 KLHDC7BQ96G42 594 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 CCDC42Q96M95 316 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 OSBPL1AQ9BXW6 950 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 SLC17A9Q9BYT1 436 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 RBSNQ9H1K0 784 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 CAAP1Q9H8G2 361 aa13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 IPO11Q9UI26 975 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-205ENST00000525079 TTC24A2A3L6 582 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-205ENST00000525079 RAD51BO15315 384 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 SPINT1O43278 529 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 AP1G1O43747 822 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 HYAL3O43820 417 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-205ENST00000525079 DFNA5O60443 496 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 PROSCO94903 275 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 TMEM253P0C7T8 217 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 THEGLP0DJG4 465 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 TIMP2P16035 220 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 IL4RP24394 825 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 IL10RBQ08334 325 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 SGCGQ13326 291 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 HNRNPDQ14103 355 aaKnown RBP13□□□□□ -0.33
TRAPPC4-205ENST00000525079 MESDQ14696 234 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 KIAA1161Q6NSJ0 714 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 SARM1Q6SZW1 724 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 KDM7AQ6ZMT4 941 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 GCNT7Q6ZNI0 430 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 SRLQ86TD4 932 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 CAMK1DQ8IU85 385 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 CHCHD4Q8N4Q1 142 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 LZTR1Q8N653 840 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 TMEM145Q8NBT3 493 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 OR13H1Q8NG92 308 aa13□□□□□ -0.33
TRAPPC4-205ENST00000525079 TSC1Q92574 1164 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms