RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CALN1Q9BXU9 219 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 SLC17A9Q9BYT1 436 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 ISCUQ9H1K1 167 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 TOR4AQ9NXH8 423 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 UBA2Q9UBT2 640 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-203ENST00000525013 LUC7L2Q9Y383 392 aaKnown RBP18.83■□□□□ 0.6
CAPN1-203ENST00000525013 KRT37O76014 449 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 PAK4O96013 591 aaPredicted RBP18.82■□□□□ 0.6
CAPN1-203ENST00000525013 SERPING1P05155 500 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 ABL2P42684 1182 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 NDST2P52849 883 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 SGCGQ13326 291 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 NFKBIBQ15653 356 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 RFX8Q6ZV50 586 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 EXOC2Q96KP1 924 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 NCAPGQ9BPX3 1015 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 TMEM121BQ9BXQ6 578 aaPredicted RBP18.82■□□□□ 0.6
CAPN1-203ENST00000525013 LRRC19Q9H756 370 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 CAPN11Q9UMQ6 739 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 ITM2BQ9Y287 266 aa18.82■□□□□ 0.6
CAPN1-203ENST00000525013 FAM221BA6H8Z2 402 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 IGLON5A6NGN9 336 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 ARHGAP42A6NI28 874 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 J3KR12 359 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 TSPAN6O43657 245 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 SDC3O75056 442 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 LRCH4O75427 683 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 LDOC1O95751 146 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-203ENST00000525013 PAPOLAP51003 745 aaKnown RBP18.81■□□□□ 0.6
CAPN1-203ENST00000525013 CYTH1Q15438 398 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 SKOR2Q2VWA4 1001 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-203ENST00000525013 LRRC73Q5JTD7 316 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 PTAR1Q7Z6K3 402 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-203ENST00000525013 TTC7BQ86TV6 843 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 OR13H1Q8NG92 308 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 ARHGEF26Q96DR7 871 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 IQCDQ96DY2 449 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 CNDP2Q96KP4 475 aaKnown RBP18.81■□□□□ 0.6
CAPN1-203ENST00000525013 SLC39A8Q9C0K1 460 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 GGT7Q9UJ14 662 aa18.81■□□□□ 0.6
CAPN1-203ENST00000525013 COL5A1P20908 1838 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-203ENST00000525013 ANKRD36A6QL64 1941 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 TMEM8BA6NDV4 472 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 A6NNZ2 444 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 DFFAO00273 331 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 ENC1O14682 589 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 TPM3P06753 285 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 ERCC2P18074 760 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 FGL2Q14314 439 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 GCNT7Q6ZNI0 430 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 Q6ZSR6 202 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 CYP4V2Q6ZWL3 525 aaPredicted RBP18.8■□□□□ 0.6
CAPN1-203ENST00000525013 PSTKQ8IV42 348 aaKnown RBP18.8■□□□□ 0.6
CAPN1-203ENST00000525013 KDF1Q8NAX2 398 aaPredicted RBP18.8■□□□□ 0.6
CAPN1-203ENST00000525013 KLHL11Q9NVR0 708 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 LHX3Q9UBR4 397 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 MFHAS1Q9Y4C4 1052 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 HS3ST3A1Q9Y663 406 aa18.8■□□□□ 0.6
CAPN1-203ENST00000525013 ANKRD11Q6UB99 2663 aaPredicted RBP18.8■□□□□ 0.6
CAPN1-203ENST00000525013 A0A087X0T9 212 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 RAD51BO15315 384 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 INSIG1O15503 277 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 PRAMEF11O60813 436 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 DKK1O94907 266 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 FAM228BP0C875 321 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 XPAP23025 273 aaPredicted RBP18.79■□□□□ 0.6
CAPN1-203ENST00000525013 PCK1P35558 622 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 DNAJC3Q13217 504 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 ACAP1Q15027 740 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 SMTNL2Q2TAL5 461 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 CCNI2Q6ZMN8 369 aaPredicted RBP18.79■□□□□ 0.6
CAPN1-203ENST00000525013 ABI3BPQ7Z7G0 1075 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 ZSCAN30Q86W11 494 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 FAM174AQ8TBP5 190 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 ZCCHC14Q8WYQ9 949 aaKnown RBP18.79■□□□□ 0.6
CAPN1-203ENST00000525013 HSPH1Q92598 858 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 VOPP1Q96AW1 172 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 BMFQ96LC9 184 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 C1QTNF2Q9BXJ5 285 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 XPO4Q9C0E2 1151 aaKnown RBP18.79■□□□□ 0.6
CAPN1-203ENST00000525013 THAP2Q9H0W7 228 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 ZWILCHQ9H900 591 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 PDFQ9HBH1 243 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 CWC15Q9P013 229 aaKnown RBP18.79■□□□□ 0.6
CAPN1-203ENST00000525013 ZMIZ1Q9ULJ6 1067 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 ACACAQ13085 2346 aa18.79■□□□□ 0.6
CAPN1-203ENST00000525013 POM121BA6NF01 834 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 H3BRJ5 948 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 FPGTO14772 594 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 PALMO75781 387 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 PIGNO95427 931 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 GYPCP04921 128 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 IL1R2P27930 398 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 CASP14P31944 242 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 HCAR3P49019 387 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 ZNF135P52742 658 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-203ENST00000525013 PIGHQ14442 188 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-203ENST00000525013 BOLA3Q53S33 107 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 CCDC122Q5T0U0 273 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 DHRS13Q6UX07 377 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms