RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 TFB1MQ8WVM0 346 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CASP10Q92851 521 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 TMEM176AQ96HP8 235 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 IGSF21Q96ID5 467 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 PIWIL1Q96J94 861 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 FAM193BQ96PV7 902 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 CALN1Q9BXU9 219 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 TIMMDC1Q9NPL8 285 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 ATP13A2Q9NQ11 1180 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 EIF2B3Q9NR50 452 aaKnown RBP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.96□□□□□ -1.14
SPIDR-223ENST00000524033 GPATCH2LQ9NWQ4 482 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 STK39Q9UEW8 545 aa7.96□□□□□ -1.14
SPIDR-223ENST00000524033 FRYLO94915 3013 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 MICAL3Q7RTP6 2002 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 SMIM31A0A1B0GVY4 71 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 TMEM221A6NGB7 291 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 M0R296 226 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 PRPSAP2O60256 369 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 SIN3BO75182 1162 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 LYPLA1O75608 230 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 TOP3BO95985 862 aaKnown RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 POMCP01189 267 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 PENKP01210 267 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ALDOAP04075 364 aaKnown RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 NFICP08651 508 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 AXLP30530 894 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 GSTT1P30711 240 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 FDFT1P37268 417 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 PTPN9P43378 593 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 SLC1A6P48664 564 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 SLC11A1P49279 550 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 IDH3AP50213 366 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 CSRP3P50461 194 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 AFF1P51825 1210 aaKnown RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 COPAP53621 1224 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 CDH8P55286 799 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 RPL10AP62906 217 aaKnown RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ZXDAP98168 799 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 TFAMQ00059 246 aaKnown RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 SLC25A3Q00325 362 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 DEUP1Q05D60 604 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 POU5F1BQ06416 359 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 PDE1CQ14123 709 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 PCBP1Q15365 356 aaKnown RBP eCLIP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 DPYSL2Q16555 572 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 FAM187BQ17R55 369 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 USP41Q3LFD5 358 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ANKRD20A4Q4UJ75 823 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 BOLA3Q53S33 107 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 UBXN11Q5T124 520 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ATF7IP2Q5U623 682 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 NOTUMQ6P988 496 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 Q6ZNB5 142 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 AGMOQ6ZNB7 445 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ZCCHC23Q6ZST2 131 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 DENND5BQ6ZUT9 1274 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 SDCCAG8Q86SQ7 713 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 TMEM173Q86WV6 379 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 EGFL6Q8IUX8 553 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 WDR75Q8IWA0 830 aaKnown RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ST13P4Q8IZP2 240 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 TMEM130Q8N3G9 435 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 MARVELD2Q8N4S9 558 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 PIWIL2Q8TC59 973 aaKnown RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 NAT14Q8WUY8 206 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 AUTS2Q8WXX7 1259 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 COL26A1Q96A83 441 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 TRIM56Q9BRZ2 755 aaKnown RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 CENPKQ9BS16 269 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 NFKBIZQ9BYH8 718 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 SLC13A1Q9BZW2 595 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 MIS12Q9H081 205 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 VCX3BQ9H321 246 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 PDZD7Q9H5P4 517 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ZNF385DQ9H6B1 395 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 MARCOQ9UEW3 520 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-223ENST00000524033 CDH22Q9UJ99 828 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ADAMTS6Q9UKP5 1117 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 ADAM28Q9UKQ2 775 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 HCFC2Q9Y5Z7 792 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 IRAK3Q9Y616 596 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 COMMD3-BMI1R4GMX3 469 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 MYLKQ15746 1914 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 TTC3P53804 2025 aa7.95□□□□□ -1.14
SPIDR-223ENST00000524033 TCF20Q9UGU0 1960 aaKnown RBP7.94□□□□□ -1.14
SPIDR-223ENST00000524033 ARL5CA6NH57 179 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 HACD1B0YJ81 288 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 INO80B-WBP1J3KQ70 363 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 TPP1O14773 563 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 NRP1O14786 923 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 DENRO43583 198 aaKnown RBP7.94□□□□□ -1.14
SPIDR-223ENST00000524033 DDHD2O94830 711 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 FBXO21O94952 628 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 CXCL8P10145 99 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 CTSAP10619 480 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 KITP10721 976 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 VAV1P15498 845 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 PDGFRAP16234 1089 aa7.94□□□□□ -1.14
SPIDR-223ENST00000524033 ZFXP17010 805 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms