RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 CAMK1DQ8IU85 385 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 TEX26Q8N6G2 289 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 OR14C36Q8NHC7 312 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 NSMCE1Q8WV22 266 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 MAML1Q92585 1016 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 TSGA13Q96PP4 275 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 ALS2CR12Q96Q35 445 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 PSKH2Q96QS6 385 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 HINFPQ9BQA5 517 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 C10orf88Q9H8K7 445 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 SGK2Q9HBY8 427 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 RBM22Q9NW64 420 aaKnown RBP eCLIP12.99□□□□□ -0.334e-11■■■■□ 26.1
VEGFA-224ENST00000523873 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 NCDNQ9UBB6 729 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 GMEB2Q9UKD1 530 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 FZD4Q9ULV1 537 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 TCRBV7S2A1N4TA0A589 114 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 C16orf96A6NNT2 1141 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 MEI4A8MW99 385 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 PPP1R12AO14974 1030 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-224ENST00000523873 MATN3O15232 486 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 FSBPO95073 299 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 JCHAINP01591 159 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 PRKCGP05129 697 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 ITIH2P19823 946 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 CR2P20023 1033 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 ITGB7P26010 798 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 PTPN7P35236 360 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 RENBPP51606 427 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 COPS2P61201 443 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 PPP2CBP62714 309 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 PPP2CAP67775 309 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 DSC2Q02487 901 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 ITKQ08881 620 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 PDK1Q15118 436 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 RPS6KA1Q15418 735 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 ZNF805Q5CZA5 627 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 LYSMD4Q5XG99 296 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 GDPD4Q6W3E5 623 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 ERN2Q76MJ5 926 aaKnown RBP12.98□□□□□ -0.33
VEGFA-224ENST00000523873 ALYREFQ86V81 257 aaKnown RBP12.98□□□□□ -0.33
VEGFA-224ENST00000523873 ZSWIM9Q86XI8 627 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 SNX19Q92543 992 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 PIGKQ92643 395 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 P3H4Q92791 437 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 FAM131CQ96AQ9 280 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 MGME1Q9BQP7 344 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 DYRK4Q9NR20 520 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 TMEM74BQ9NUR3 256 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 GGT7Q9UJ14 662 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 ITM2BQ9Y287 266 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 TTLL3Q9Y4R7 772 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 SLCO1B1Q9Y6L6 691 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.98□□□□□ -0.33
VEGFA-224ENST00000523873 TDRD6O60522 2096 aaKnown RBP12.98□□□□□ -0.33
VEGFA-224ENST00000523873 PCDH15Q96QU1 1955 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 GPR179Q6PRD1 2367 aa12.98□□□□□ -0.33
VEGFA-224ENST00000523873 OTOGLQ3ZCN5 2332 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3DA0A087WVF3 549 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3IA0A087WXS9 549 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3EA0A087X179 549 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3KA0A087X1G2 549 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3FA6NER0 549 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-224ENST00000523873 METTL12A8MUP2 240 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3LB9A6J9 549 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 ZSCAN12O43309 604 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 PLRG1O43660 514 aaKnown RBP12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3HP0C7X1 549 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 ADRB3P13945 408 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 CCNB1P14635 433 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 CSNK1DP48730 415 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 NEK3P51956 506 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
VEGFA-224ENST00000523873 SEMG2Q02383 582 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 RAD51Q06609 339 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 SPEM2Q0P670 501 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 HNRNPDQ14103 355 aaKnown RBP12.97□□□□□ -0.33
VEGFA-224ENST00000523873 IHHQ14623 411 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 PRKD1Q15139 912 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-224ENST00000523873 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 KIAA0895LQ68EN5 471 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3GQ6DHY5 549 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3CQ6IPX1 549 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 FBXL19Q6PCT2 694 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 CYP2U1Q7Z449 544 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 LRRC49Q8IUZ0 686 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 RGL4Q8IZJ4 473 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TBC1D3Q8IZP1 549 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-224ENST00000523873 SLC35F6Q8N357 371 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 CNTD1Q8N815 330 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 KLK6Q92876 244 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 PPP1R16AQ96I34 528 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 LRIG1Q96JA1 1093 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 NUDCD1Q96RS6 583 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 SEMA3CQ99985 751 aa12.97□□□□□ -0.33
VEGFA-224ENST00000523873 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms