RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SLC28A2O43868 658 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 CD160O95971 181 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 ATP11AP98196 1134 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 RAPGEF1Q13905 1077 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 ZNF805Q5CZA5 627 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 TRNP1Q6NT89 227 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 INO80CQ6PI98 192 aaPredicted RBP26.33■■□□□ 1.81
PVT1-219ENST00000523427 IGF2-ASQ6U949 168 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 WDR36Q8NI36 951 aaKnown RBP26.33■■□□□ 1.81
PVT1-219ENST00000523427 GRAMD1AQ96CP6 724 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 KLHL32Q96NJ5 620 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 HAPLN3Q96S86 360 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 SLC13A1Q9BZW2 595 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 DNAI1Q9UI46 699 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 RWDD2AQ9UIY3 292 aa26.33■■□□□ 1.81
PVT1-219ENST00000523427 PNMA8BQ9ULN7 279 aaPredicted RBP26.33■■□□□ 1.81
PVT1-219ENST00000523427 LZTS3O60299 673 aaPredicted RBP26.32■■□□□ 1.8
PVT1-219ENST00000523427 MMP20O60882 483 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 SPIDRQ14159 915 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 PTK2BQ14289 1009 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 RAB7BQ96AH8 199 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 MED8Q96G25 268 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 LRRC61Q9BV99 259 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 BOCQ9BWV1 1114 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 NDFIP2Q9NV92 336 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 SIRPGQ9P1W8 387 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 PADI4Q9UM07 663 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 DOLKQ9UPQ8 538 aa26.32■■□□□ 1.8
PVT1-219ENST00000523427 MYO18BQ8IUG5 2567 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 GTPBP10A4D1E9 387 aaKnown RBP26.31■■□□□ 1.8
PVT1-219ENST00000523427 AGRPO00253 132 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 YY2O15391 372 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 TCEA3O75764 348 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 CELA2BP08218 269 aaPredicted RBP26.31■■□□□ 1.8
PVT1-219ENST00000523427 TSHRP16473 764 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 ITIH2P19823 946 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 IGFALSP35858 605 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 BPIFB4P59827 614 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 CLN3Q13286 438 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 POLD3Q15054 466 aaPredicted RBP26.31■■□□□ 1.8
PVT1-219ENST00000523427 RAB6CQ53S08 254 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 C6orf132Q5T0Z8 1188 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 ATXN7L2Q5T6C5 722 aaPredicted RBP26.31■■□□□ 1.8
PVT1-219ENST00000523427 ACBD5Q5T8D3 534 aaPredicted RBP26.31■■□□□ 1.8
PVT1-219ENST00000523427 PHLDB2Q86SQ0 1253 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 TTC7BQ86TV6 843 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 IRF2BP1Q8IU81 584 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 FAM71AQ8IYT1 594 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 EMC1Q8N766 993 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 NETO2Q8NC67 525 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 DENND6BQ8NEG7 585 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 SNRNP27Q8WVK2 155 aaKnown RBP26.31■■□□□ 1.8
PVT1-219ENST00000523427 NAT6Q93015 286 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 CLPBQ9H078 707 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 RAB6CQ9H0N0 254 aa26.31■■□□□ 1.8
PVT1-219ENST00000523427 CCDC187A0A096LP49 1063 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 CYSRT1A8MQ03 144 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 CDRT15L2A8MXV6 281 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 LMO7DNF2Z398 122 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 CYP11B1P15538 503 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 GABRB2P47870 512 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 SKOR1P84550 965 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 CDO1Q16878 200 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 TPD52L1Q16890 204 aaPredicted RBP26.3■■□□□ 1.8
PVT1-219ENST00000523427 ESRP1Q6NXG1 681 aaKnown RBP26.3■■□□□ 1.8
PVT1-219ENST00000523427 ZSCAN30Q86W11 494 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 ZNF354CQ86Y25 554 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 JAMLQ86YT9 394 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 CENPTQ96BT3 561 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 CLMPQ9H6B4 373 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 EPB41L5Q9HCM4 733 aa26.3■■□□□ 1.8
PVT1-219ENST00000523427 MBNL1Q9NR56 388 aaKnown RBP26.3■■□□□ 1.8
PVT1-219ENST00000523427 EIF4A3P38919 411 aaKnown RBP26.29■■□□□ 1.8
PVT1-219ENST00000523427 SNRPD1P62314 119 aaKnown RBP26.29■■□□□ 1.8
PVT1-219ENST00000523427 CAMK4Q16566 473 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 MYLK3Q32MK0 819 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 PRICKLE2Q7Z3G6 844 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 OR2AP1Q8NGE2 309 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 ASB12Q8WXK4 309 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 CPA5Q8WXQ8 436 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 ARHGEF2Q92974 986 aaKnown RBP26.29■■□□□ 1.8
PVT1-219ENST00000523427 ISG20Q96AZ6 181 aaKnown RBP26.29■■□□□ 1.8
PVT1-219ENST00000523427 WRAP53Q9BUR4 548 aaKnown RBP26.29■■□□□ 1.8
PVT1-219ENST00000523427 MAGEB5Q9BZ81 275 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 HPCAL4Q9UM19 191 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 SSUH2Q9Y2M2 353 aa26.29■■□□□ 1.8
PVT1-219ENST00000523427 DOCK4Q8N1I0 1966 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 TM7SF2O76062 418 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 POP4O95707 220 aaKnown RBP26.28■■□□□ 1.8
PVT1-219ENST00000523427 CDH5P33151 784 aaPredicted RBP26.28■■□□□ 1.8
PVT1-219ENST00000523427 SCNN1AP37088 669 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 PDX1P52945 283 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 PPARDQ03181 441 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 KCNC4Q03721 635 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 RD3Q7Z3Z2 195 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 HID1Q8IV36 788 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 CXorf40AQ8TE69 158 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 ARHGEF26Q96DR7 871 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 FOXP3Q9BZS1 431 aa26.28■■□□□ 1.8
PVT1-219ENST00000523427 METTL5Q9NRN9 209 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms