RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CDR2Q01850 454 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 POLD3Q15054 466 aaPredicted RBP15.66■□□□□ 0.1
MRPS28-209ENST00000522987 ARL13BQ3SXY8 428 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 ZNF805Q5CZA5 627 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 PERM1Q5SV97 790 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 NYAP1Q6ZVC0 841 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 OR2AP1Q8NGE2 309 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 FAM172AQ8WUF8 416 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 EXOC2Q96KP1 924 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 PCDHB18PQ96TA0 734 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 C1QTNF2Q9BXJ5 285 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 CPNE5Q9HCH3 593 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 GPR27Q9NS67 375 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 SEPT11Q9NVA2 429 aaKnown RBP15.66■□□□□ 0.1
MRPS28-209ENST00000522987 WDR70Q9NW82 654 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 DACH1Q9UI36 760 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 COQ6Q9Y2Z9 468 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 C2CD4BA6NLJ0 364 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 AP1G1O43747 822 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 RAMP2O60895 175 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 GCATO75600 419 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 TMCC1O94876 653 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 CYP1A1P04798 512 aaPredicted RBP15.65■□□□□ 0.1
MRPS28-209ENST00000522987 CELA2BP08218 269 aaPredicted RBP15.65■□□□□ 0.1
MRPS28-209ENST00000522987 MMP8P22894 467 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 RABIFP47224 123 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 DUSP3P51452 185 aaPredicted RBP15.65■□□□□ 0.1
MRPS28-209ENST00000522987 THOP1P52888 689 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 HDAC4P56524 1084 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 SNRPD1P62314 119 aaKnown RBP15.65■□□□□ 0.1
MRPS28-209ENST00000522987 MYLK3Q32MK0 819 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 SCYL2Q6P3W7 929 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 GPR155Q7Z3F1 870 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 DCP2Q8IU60 420 aaKnown RBP15.65■□□□□ 0.1
MRPS28-209ENST00000522987 VOPP1Q96AW1 172 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 ATXN7L3BQ96GX2 97 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 MBNL1Q9NR56 388 aaKnown RBP15.65■□□□□ 0.1
MRPS28-209ENST00000522987 TMEM248Q9NWD8 314 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 APOBEC3BQ9UH17 382 aaKnown RBP15.65■□□□□ 0.1
MRPS28-209ENST00000522987 HPCAL4Q9UM19 191 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 SATB2Q9UPW6 733 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 MGAQ8IWI9 3026 aa15.65■□□□□ 0.1
MRPS28-209ENST00000522987 UNC13CQ8NB66 2214 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 A0A1W2PNU3 283 aaPredicted RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 AGRPO00253 132 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 ATXN7O15265 892 aaPredicted RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 INSIG1O15503 277 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 TSPAN6O43657 245 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 CREB3O43889 395 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 GSRP00390 522 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 RFC1P35251 1148 aaPredicted RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 SOX5P35711 763 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 MAPKAPK2P49137 400 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 ADKP55263 362 aaKnown RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 PCBP4P57723 403 aaKnown RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 C19orf57Q0VDD7 668 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 KRT31Q15323 416 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 PRRT3Q5FWE3 981 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 ACBD5Q5T8D3 534 aaPredicted RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 ARHGAP40Q5TG30 622 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 FAXCQ5TGI0 409 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 ZCCHC8Q6NZY4 707 aaKnown RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 GDPD4Q6W3E5 623 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 TTC7BQ86TV6 843 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 PHACTR4Q8IZ21 702 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 CACTIN-AS1Q8N1I8 211 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 ZNF248Q8NDW4 579 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 ISG20Q96AZ6 181 aaKnown RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 IFT43Q96FT9 208 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 PCMTD1Q96MG8 357 aaPredicted RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 IL12RB2Q99665 862 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 DUSP23Q9BVJ7 150 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 SELENOOQ9BVL4 669 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 MAGEH1Q9H213 219 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 NOL6Q9H6R4 1146 aaKnown RBP15.64■□□□□ 0.09
MRPS28-209ENST00000522987 CHMP5Q9NZZ3 219 aa15.64■□□□□ 0.09
MRPS28-209ENST00000522987 KLK10O43240 276 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 CCP110O43303 1012 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 PIGNO95427 931 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 POP4O95707 220 aaKnown RBP15.63■□□□□ 0.09
MRPS28-209ENST00000522987 PRKCGP05129 697 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 KRT3P12035 628 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 GPD1P21695 349 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 EEF1GP26641 437 aaKnown RBP15.63■□□□□ 0.09
MRPS28-209ENST00000522987 ETFBP38117 255 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 PFN3P60673 137 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 RHOAP61586 193 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 ISXQ2M1V0 245 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 KLHL40Q2TBA0 621 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 WDR59Q6PJI9 974 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 ZNF677Q86XU0 584 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 SLC35F3Q8IY50 421 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 FAM181AQ8N9Y4 354 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 FAM174AQ8TBP5 190 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 CXorf40AQ8TE69 158 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 HMCESQ96FZ2 354 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 VCPIP1Q96JH7 1222 aa15.63■□□□□ 0.09
MRPS28-209ENST00000522987 LENG8Q96PV6 779 aaPredicted RBP15.63■□□□□ 0.09
MRPS28-209ENST00000522987 LRRC61Q9BV99 259 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms