RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ZNF574Q6ZN55 896 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 ATG14Q6ZNE5 492 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 CARM1Q86X55 608 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 NUDCD3Q8IVD9 361 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 NIPA2Q8N8Q9 360 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 FBXO15Q8NCQ5 510 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 ST8SIA2Q92186 375 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 MYDGFQ969H8 173 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF556Q9HAH1 456 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 SPACA1Q9HBV2 294 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 FBXO6Q9NRD1 293 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 NRBP2Q9NSY0 501 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 FBXO28Q9NVF7 368 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 DCTN4Q9UJW0 460 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 SF3B1O75533 1304 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 MN1Q10571 1320 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 DCCP43146 1447 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 A0A0G2JND7 137 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 A0A1W2PRG0 241 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 MTMR11A4FU01 709 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 FAM155AB1AL88 458 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 ERVV-1B6SEH8 477 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 TREHO43280 583 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 SORBS3O60504 671 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 TOM1L1O75674 476 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 WDPCPO95876 746 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 GSNP06396 782 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 HOXD4P09016 255 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 EIF2AK2P19525 551 aaKnown RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 XPAP23025 273 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 CHRNA5P30532 468 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 RECQLP46063 649 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 CPA2P48052 419 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 KLK7P49862 253 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 TPMTP51580 245 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 YWHAEP62258 255 aaKnown RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 BST2Q10589 180 aaKnown RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 MORF4L2Q15014 288 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 AGAP6Q5VW22 663 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 KRT80Q6KB66 452 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF544Q6NX49 715 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 KIAA1324Q6UXG2 1013 aaKnown RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 ZYG11AQ6WRX3 759 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 TMEM26Q6ZUK4 368 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF438Q7Z4V0 828 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 HORMAD1Q86X24 394 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 CLEC4FQ8N1N0 589 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 TP53I13Q8NBR0 393 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 ABHD11Q8NFV4 315 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 FBXO27Q8NI29 283 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 DDX1Q92499 740 aaKnown RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 SNAPC3Q92966 411 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 PRR11Q96HE9 360 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 OXNAD1Q96HP4 312 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 AGAP4Q96P64 663 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 SLC4A9Q96Q91 983 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 SERPINI1Q99574 410 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 NPLQ9BXD5 320 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 GPN2Q9H9Y4 310 aaPredicted RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 TRPV4Q9HBA0 871 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 AGPAT3Q9NRZ7 376 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 OLAHQ9NV23 265 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 B3GNT2Q9NY97 397 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 CPA4Q9UI42 421 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 GAB2Q9UQC2 676 aa8.38□□□□□ -1.07
HMGB4-204ENST00000522796 RUVBL1Q9Y265 456 aaKnown RBP8.38□□□□□ -1.07
HMGB4-204ENST00000522796 PMS2P1A4D2B8 440 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 F2P00734 622 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 DNTTP04053 509 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 CTSHP09668 335 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 CYP11B1P15538 503 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 ITGB6P18564 788 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 HK1P19367 917 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 DDCP20711 480 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 DDOSTP39656 456 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 AFMP43652 599 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TM4SF4P48230 202 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 ALDH7A1P49419 539 aaKnown RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 GSK3AP49840 483 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 MAPK12P53778 367 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 MLLT10P55197 1068 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 FLI1Q01543 452 aaPredicted RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 MAPK7Q13164 816 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TARBP2Q15633 366 aaKnown RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 CARTPTQ16568 116 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 HES5Q5TA89 166 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 ANKRD40Q6AI12 368 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 SLC9A4Q6AI14 798 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 NLRC3Q7RTR2 1065 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 ZSCAN29Q8IWY8 852 aaPredicted RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 MFSD2AQ8NA29 543 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 ZBTB44Q8NCP5 570 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 HUS1BQ8NHY5 278 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 SPPL3Q8TCT6 385 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 UFD1Q92890 307 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 PTP4A1Q93096 173 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 DCPSQ96C86 337 aaKnown RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 MSANTD3Q96H12 275 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms