RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 TMEM88BA6NKF7 163 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 WASH4PA8MWX3 477 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 GRID2O43424 1007 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 OAZ2O95190 189 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 JUNP05412 331 aaKnown RBP10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CKBP12277 381 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 COX4I1P13073 169 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 STMN1P16949 149 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TBX4P57082 545 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 NRG1Q02297 640 aaPredicted RBP10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SLC10A7Q0GE19 358 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 EFEMP1Q12805 493 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MS4A13Q5J8X5 152 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CNSTQ6PJW8 725 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TMC7Q7Z402 723 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CCDC117Q8IWD4 279 aaPredicted RBP10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 COLGALT2Q8IYK4 626 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ATAD1Q8NBU5 361 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CMTM5Q96DZ9 223 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 B3GALT6Q96L58 329 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TTC1Q99614 292 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 NUF2Q9BZD4 464 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MRM3Q9HC36 420 aaKnown RBP10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PRDM5Q9NQX1 630 aaPredicted RBP10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TBC1D13Q9NVG8 400 aa10.88□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PLXNA3P51805 1871 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CD151P48509 253 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PSEN1P49768 467 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 RPL14P50914 215 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SREBF2Q12772 1141 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 LSM12Q3MHD2 195 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 KIAA0930Q6ICG6 404 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MSANTD2Q6P1R3 559 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 DEFB107AQ8IZN7 70 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ACTRT2Q8TDY3 377 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PTCD2Q8WV60 388 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CCDC124Q96CT7 223 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PABPC5Q96DU9 382 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SGF29Q96ES7 293 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 C1orf74Q96LT6 269 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 LENG8Q96PV6 779 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 NDNQ99608 321 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SLC25A51Q9H1U9 297 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CDH22Q9UJ99 828 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 FBXO5Q9UKT4 447 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 HDAC3O15379 428 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CCNT2O60583 730 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SMNDC1O75940 238 aaKnown RBP eCLIP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MMP2P08253 660 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TFEBP19484 476 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CST5P28325 142 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SERPINB5P36952 375 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CD86P42081 329 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 DSC2Q02487 901 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 BTKQ06187 659 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ITKQ08881 620 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 FSCBQ5H9T9 825 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PPM1LQ5SGD2 360 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SEL1L3Q68CR1 1132 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 NEPROQ6NW34 567 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PGM2L1Q6PCE3 622 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CIR1Q86X95 450 aaPredicted RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 DCP1BQ8IZD4 617 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 UMODL1-AS1Q8N2C9 162 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 IGSF8Q969P0 613 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 FAM136AQ96C01 138 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 IMP4Q96G21 291 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 UBE2OQ9C0C9 1292 aaKnown RBP10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ANGPTL2Q9UKU9 493 aa10.87□□□□□ -0.67
RAB11FIP1-204ENST00000522774 NEMP2A6NFY4 417 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TMEM233B4DJY2 109 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CCL22O00626 93 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 UPP2O95045 317 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 BAG2O95816 211 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 COL6A2P12110 1019 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TMEM198Q66K66 360 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SLC24A5Q71RS6 500 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MIB1Q86YT6 1006 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CCNYL1Q8N7R7 359 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TXNDC5Q8NBS9 432 aaKnown RBP10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MICAL1Q8TDZ2 1067 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 HEXDCQ8WVB3 486 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 UCMAQ8WVF2 138 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PYDC1Q8WXC3 89 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PSMG2Q969U7 264 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 C8orf48Q96LL4 319 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 OLFM1Q99784 485 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ATP13A1Q9HD20 1204 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SSX2IPQ9Y2D8 614 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 THSD7BQ9C0I4 1608 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SKAP2O75563 359 aaPredicted RBP10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 GJB3O75712 270 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 HMBSP08397 361 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 RHOQP17081 205 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PAMP19021 973 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 AP2B1P63010 937 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 CCNIQ14094 377 aa10.86□□□□□ -0.67
RAB11FIP1-204ENST00000522774 HNRNPDQ14103 355 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms