RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PDK2Q15119 407 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 ZNF284Q2VY69 593 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 SETMARQ53H47 684 aaPredicted RBP16.61■□□□□ 0.25
PABPC1-221ENST00000522720 NAPEPLDQ6IQ20 393 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 LAYNQ6UX15 382 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 GDPD4Q6W3E5 623 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 ADAT2Q7Z6V5 191 aaKnown RBP16.61■□□□□ 0.25
PABPC1-221ENST00000522720 PIP4P1Q86T03 277 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 HORMAD1Q86X24 394 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 KCTD6Q8NC69 237 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 RAB7BQ96AH8 199 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 SKA1Q96BD8 255 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 EXOC2Q96KP1 924 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 KLHL32Q96NJ5 620 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 AASDHPPTQ9NRN7 309 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 FADS3Q9Y5Q0 445 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 TMEM131Q92545 1883 aa16.61■□□□□ 0.25
PABPC1-221ENST00000522720 PRAMEF26H0Y7S4 382 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 INSIG1O15503 277 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 PCDH8O95206 1070 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 KCNK5O95279 499 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 WNT1P04628 370 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 ZNF883P0CG24 379 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 FECHP22830 423 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 SERPINB6P35237 376 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 GJC1P36383 396 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 CTSKP43235 329 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 CSNK1DP48730 415 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 NSUN2Q08J23 767 aaKnown RBP eCLIP16.6■□□□□ 0.25
PABPC1-221ENST00000522720 GRM3Q14832 879 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 MAP7D3Q8IWC1 876 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 MFSD2AQ8NA29 543 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 TSEN2Q8NCE0 465 aaKnown RBP16.6■□□□□ 0.25
PABPC1-221ENST00000522720 FEM1CQ96JP0 617 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 ZNF599Q96NL3 588 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 ZNF670Q9BS34 389 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 CALN1Q9BXU9 219 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 IL21RQ9HBE5 538 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 DKK3Q9UBP4 350 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 ZFR2Q9UPR6 939 aaKnown RBP16.6■□□□□ 0.25
PABPC1-221ENST00000522720 SHROOM3Q8TF72 1996 aa16.6■□□□□ 0.25
PABPC1-221ENST00000522720 MED19A0JLT2 244 aaPredicted RBP16.59■□□□□ 0.25
PABPC1-221ENST00000522720 TSPAN6O43657 245 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 MAFKO60675 156 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 CEACAM1P13688 526 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 CYLC1P35663 651 aaPredicted RBP16.59■□□□□ 0.25
PABPC1-221ENST00000522720 ABL2P42684 1182 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 RGRP47804 291 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 C21orf59P57076 290 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 RPS21P63220 83 aaKnown RBP16.59■□□□□ 0.25
PABPC1-221ENST00000522720 TMEM259Q4ZIN3 620 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 SLC45A4Q5BKX6 768 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 ANKRD20A8PQ5CZ79 823 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 TMCO4Q5TGY1 634 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 KIAA1161Q6NSJ0 714 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 PSAPL1Q6NUJ1 521 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 TTC7BQ86TV6 843 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 IQCHQ86VS3 1027 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 TMTC1Q8IUR5 882 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 LRRC49Q8IUZ0 686 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 PCDH19Q8TAB3 1148 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 HCAR2Q8TDS4 363 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 KLK6Q92876 244 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 ZNF641Q96N77 438 aaPredicted RBP16.59■□□□□ 0.25
PABPC1-221ENST00000522720 PSKH2Q96QS6 385 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 CINPQ9BW66 212 aaPredicted RBP16.59■□□□□ 0.25
PABPC1-221ENST00000522720 SUV39H2Q9H5I1 410 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 SEPT3Q9UH03 358 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 FNDC3AQ9Y2H6 1198 aaKnown RBP16.59■□□□□ 0.25
PABPC1-221ENST00000522720 PCDHA13Q9Y5I0 950 aa16.59■□□□□ 0.25
PABPC1-221ENST00000522720 TP53BP1Q12888 1972 aaPredicted RBP16.58■□□□□ 0.25
PABPC1-221ENST00000522720 TLR4O00206 839 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 KCNK3O14649 394 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 AREL1O15033 823 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 SLC31A1O15431 190 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 DFNA5O60443 496 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 PEX11BO96011 259 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 TIMP2P16035 220 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 PRLRP16471 622 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 KDELR1P24390 212 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 SLC1A1P43005 524 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 NOVA1P51513 510 aaKnown RBP16.58■□□□□ 0.24
PABPC1-221ENST00000522720 HADHBP55084 474 aaKnown RBP16.58■□□□□ 0.24
PABPC1-221ENST00000522720 SLC10A7Q0GE19 358 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 OVGP1Q12889 678 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 GSE1Q14687 1217 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 LBRQ14739 615 aaKnown RBP16.58■□□□□ 0.24
PABPC1-221ENST00000522720 STAT4Q14765 748 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 PAFAH1B3Q15102 231 aaKnown RBP16.58■□□□□ 0.24
PABPC1-221ENST00000522720 SPA17Q15506 151 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 ZNF423Q2M1K9 1284 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 LRRC38Q5VT99 294 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 SEL1L3Q68CR1 1132 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 SRLQ86TD4 932 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 TMEM145Q8NBT3 493 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 DEFB124Q8NES8 71 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 RAPGEF5Q92565 580 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 FAF2Q96CS3 445 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 TUBGCP5Q96RT8 1024 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms