RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 SUGP1Q8IWZ8 645 aaKnown RBP13.55□□□□□ -0.24
CLK4-210ENST00000522136 PCDH20Q8N6Y1 951 aaKnown RBP13.55□□□□□ -0.24
CLK4-210ENST00000522136 ZNF513Q8N8E2 541 aaPredicted RBP13.55□□□□□ -0.24
CLK4-210ENST00000522136 OR2A12Q8NGT7 310 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 PTPRN2Q92932 1015 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 EXOC4Q96A65 974 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 TADA1Q96BN2 335 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 HECAQ9UBI9 543 aaPredicted RBP13.55□□□□□ -0.24
CLK4-210ENST00000522136 FAM153AQ9UHL3 310 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 NDRG2Q9UN36 371 aaKnown RBP13.55□□□□□ -0.24
CLK4-210ENST00000522136 STARD13Q9Y3M8 1113 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 PCDHGC4Q9Y5F7 938 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 KRBA1A5PL33 1030 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 AP2A1O95782 977 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 IGSF6O95976 241 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 FAM153BP0C7A2 387 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 CHRM1P11229 460 aaPredicted RBP13.54□□□□□ -0.24
CLK4-210ENST00000522136 VASPP50552 380 aaPredicted RBP13.54□□□□□ -0.24
CLK4-210ENST00000522136 CCNHP51946 323 aaPredicted RBP13.54□□□□□ -0.24
CLK4-210ENST00000522136 GEMP55040 296 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 WNT3AP56704 352 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 SNRPD1P62314 119 aaKnown RBP13.54□□□□□ -0.24
CLK4-210ENST00000522136 CUL1Q13616 776 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 MORF4L2Q15014 288 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 MYLK3Q32MK0 819 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 FAM153CQ494X1 144 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 WDR93Q6P2C0 686 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 SERPINA13PQ6UXR4 307 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 PCGF5Q86SE9 256 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 KLHDC8BQ8IXV7 354 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 BBOF1Q8ND07 529 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 VOPP1Q96AW1 172 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 MRGPRX2Q96LB1 330 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 GDAP1L1Q96MZ0 367 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 FICDQ9BVA6 458 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 TMEM245Q9H330 911 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 HAUS2Q9NVX0 235 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 MUTYHQ9UIF7 546 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 AAR2Q9Y312 384 aaKnown RBP13.54□□□□□ -0.24
CLK4-210ENST00000522136 PIGNO95427 931 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 SERPINF2P08697 491 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 HNRNPLP14866 589 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLK4-210ENST00000522136 DRD1P21728 446 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 CHRNA4P43681 627 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 CAMK1DQ8IU85 385 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 CHPFQ8IZ52 775 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 GJD3Q8N144 294 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 ARHGEF3Q9NR81 526 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 FBXL21Q9UKT6 434 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 RAB21Q9UL25 225 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 SLC8A2Q9UPR5 921 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 STON1Q9Y6Q2 735 aa13.54□□□□□ -0.24
CLK4-210ENST00000522136 AVILO75366 819 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 GSRP00390 522 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 TPSB2P20231 275 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 CSNK1DP48730 415 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 TRAF2Q12933 501 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 MPP3Q13368 585 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 TPSAB1Q15661 275 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 HNRNPA1L2Q32P51 320 aaKnown RBP13.53□□□□□ -0.24
CLK4-210ENST00000522136 FNBP1LQ5T0N5 605 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 ZNF534Q76KX8 674 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 HOOK3Q86VS8 718 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 OR52K1Q8NGK4 314 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 ZDHHC6Q9H6R6 413 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 EIF2B3Q9NR50 452 aaKnown RBP13.53□□□□□ -0.24
CLK4-210ENST00000522136 CHKBQ9Y259 395 aa13.53□□□□□ -0.24
CLK4-210ENST00000522136 SIN3BO75182 1162 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 BANF1O75531 89 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 EPHX1P07099 455 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 PDHA1P08559 390 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 TNFRSF8P28908 595 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 ADRA1AP35348 466 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 RECQLP46063 649 aaPredicted RBP13.52□□□□□ -0.24
CLK4-210ENST00000522136 AP1S1P61966 158 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 MSS51Q4VC12 460 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 HP1BP3Q5SSJ5 553 aaPredicted RBP13.52□□□□□ -0.24
CLK4-210ENST00000522136 C9orf64Q5T6V5 341 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 ZNF852Q6ZMS4 543 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 CAND1Q86VP6 1230 aaKnown RBP13.52□□□□□ -0.24
CLK4-210ENST00000522136 STK40Q8N2I9 435 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 SLC25A41Q8N5S1 370 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 KDM1BQ8NB78 822 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 GRIN3AQ8TCU5 1115 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 PDCD6IPQ8WUM4 868 aaKnown RBP13.52□□□□□ -0.24
CLK4-210ENST00000522136 RUBCNQ92622 972 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 TBL1YQ9BQ87 522 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 FSD1LQ9BXM9 530 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 LRRC40Q9H9A6 602 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 VPS45Q9NRW7 570 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 WNT16Q9UBV4 365 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 MTF2Q9Y483 593 aaPredicted RBP13.52□□□□□ -0.24
CLK4-210ENST00000522136 RAI2Q9Y5P3 530 aa13.52□□□□□ -0.24
CLK4-210ENST00000522136 EDDM13A0A1B0GTR0 161 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 GOLGA6CA6NDK9 693 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 GOLGA6BA6NDN3 693 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 ERI2A8K979 691 aaKnown RBP13.52□□□□□ -0.25
CLK4-210ENST00000522136 MAN2B1O00754 1011 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 PSMD3O43242 534 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms