RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ZW10O43264 779 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 ACSL4O60488 711 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 EXOC3O60645 756 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 PRAMEF10O60809 474 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 CNTN5O94779 1100 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 IGLV3-27P01718 113 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 C4BPAP04003 597 aaKnown RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 PRNPP04156 253 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 ANXA6P08133 673 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 ALPIP09923 528 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 PNLIPP16233 465 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 PRLRP16471 622 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 DCTP40126 519 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 BLKP51451 505 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 CYP2J2P51589 502 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 SGSHP51688 502 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 TKTL1P51854 596 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 PLK1P53350 603 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 RPS21P63220 83 aaKnown RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 CYP4F2P78329 520 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 AMPD3Q01432 767 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 MC1RQ01726 317 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 SRSF6Q13247 344 aaKnown RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 SETDB1Q15047 1291 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 ELOCQ15369 112 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 CLPPQ16740 277 aaPredicted RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 ZACNQ401N2 412 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 PIP5KL1Q5T9C9 394 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 CAPRIN2Q6IMN6 1127 aaKnown RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 MSANTD2Q6P1R3 559 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 RFWD3Q6PCD5 774 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 CRTC1Q6UUV9 634 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 KRBA2Q6ZNG9 492 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 BRAPQ7Z569 592 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 B3GNT8Q7Z7M8 397 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 PIGZQ86VD9 579 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 KRTAP1-3Q8IUG1 177 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 SLC35F3Q8IY50 421 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 SIX6OS1Q8N1H7 587 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 FSTL5Q8N475 847 aaPredicted RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 IL22RA1Q8N6P7 574 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 TEX19Q8NA77 164 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 ANKRD52Q8NB46 1076 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 CCDC150Q8NCX0 1101 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 DENND6BQ8NEG7 585 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 TMIEQ8NEW7 156 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 ZNF417Q8TAU3 575 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 ZNF507Q8TCN5 953 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 LMX1AQ8TE12 382 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 PARD3BQ8TEW8 1205 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 TMEM174Q8WUU8 243 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 APOBEC4Q8WW27 367 aaKnown RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 SGSM3Q96HU1 749 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 RPL10LQ96L21 214 aaKnown RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 LENG8Q96PV6 779 aaPredicted RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 ZNF587Q96SQ5 575 aaPredicted RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 HDAC8Q9BY41 377 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 SLC13A1Q9BZW2 595 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 TNMDQ9H2S6 317 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 PRDM8Q9NQV8 689 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 CNGB3Q9NQW8 809 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 STIM2Q9P246 746 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 DKK3Q9UBP4 350 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 APOBEC3BQ9UH17 382 aaKnown RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 SFMBT1Q9UHJ3 866 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 SLCO3A1Q9UIG8 710 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 CA5BQ9Y2D0 317 aa5□□□□□ -1.61
SDCBP-207ENST00000520168 SETD2Q9BYW2 2564 aaPredicted RBP5□□□□□ -1.61
SDCBP-207ENST00000520168 TACC2O95359 2948 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 PRR19A6NJB7 356 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 LRRIQ3A6PVS8 624 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 EFCAB7A8K855 629 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 C9orf172C9J069 976 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 XPO1O14980 1071 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 CLIC2O15247 247 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 TGFB1I1O43294 461 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 MTSS1O43312 755 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 AP1G1O43747 822 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 PCDH8O95206 1070 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 VNN1O95497 513 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 RPLP0P05388 317 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 HSP90AA1P07900 732 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 HGFP14210 728 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 STAT6P42226 847 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 PIK3CAP42336 1068 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 SERPINB4P48594 390 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 THOP1P52888 689 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 COPB1P53618 953 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ADKP55263 362 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 TBX4P57082 545 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 TAS2R38P59533 333 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 YPEL5P62699 121 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 NUCB2P80303 420 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ZFP36L1Q07352 338 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 BST2Q10589 180 aaKnown RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 MTA1Q13330 715 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 PDE1CQ14123 709 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 NAA30Q147X3 362 aaPredicted RBP4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ACCSLQ4AC99 568 aa4.99□□□□□ -1.61
SDCBP-207ENST00000520168 ZNF542PQ5EBM4 170 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms