RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 BCLAF3A2AJT9 711 aaKnown RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 EDIL3O43854 480 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 ABCB1P08183 1280 aaPredicted RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 PCNAP12004 261 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 HGFP14210 728 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 PSME3P61289 254 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 HSPA14Q0VDF9 509 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 FSTL4Q6MZW2 842 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 ESRP1Q6NXG1 681 aaKnown RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 PKN3Q6P5Z2 889 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 DDHD1Q8NEL9 900 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 CMASQ8NFW8 434 aaPredicted RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 RSPH1Q8WYR4 309 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 GMLQ99445 158 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 SLC25A23Q9BV35 468 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 LIMD1Q9UGP4 676 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 BLOC1S6Q9UL45 172 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 RAP2CQ9Y3L5 183 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 DPPA5A6NC42 116 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 RGS20O76081 388 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 PIK3R1P27986 724 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 CHRNA4P43681 627 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 PRIM2P49643 509 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 RAB27AP51159 221 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 GPX6P59796 221 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 DHDDSQ86SQ9 333 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 ADCK1Q86TW2 530 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 NAT8LQ8N9F0 302 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 SCAMP5Q8TAC9 235 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 SEPT8Q92599 483 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 LENG8Q96PV6 779 aaPredicted RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 DPY30Q9C005 99 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 ZFP14Q9HCL3 533 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 CAPN8A6NHC0 703 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 SLC15A5A6NIM6 579 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 DAB1O75553 588 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 LINC00032P0C843 101 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 CRHR1P34998 444 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 ZNF280AP59817 542 aaPredicted RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 UBE3AQ05086 875 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 ZNF618Q5T7W0 954 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 LRRC8BQ6P9F7 803 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 VPS37AQ8NEZ2 397 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 FAM120BQ96EK7 910 aaKnown RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 NR1H4Q96RI1 486 aaPredicted RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 SLC4A5Q9BY07 1137 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 VPS45Q9NRW7 570 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 CATSPERZQ9NTU4 200 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 AP4S1Q9Y587 144 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 LINC00854A0A1B0GVQ3 168 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 C9IYK1 514 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 H7C4K7 107 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 SIN3BO75182 1162 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 URODP06132 367 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 ELNP15502 786 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 TSHRP16473 764 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 NMBRP28336 390 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 GRK4P32298 578 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 IFNA8P32881 189 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 ATP5C1P36542 298 aaKnown RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 CXCR3P49682 368 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 GJA9P57773 515 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 DUSP4Q13115 394 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 KLF10Q13118 480 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 FRG1Q14331 258 aaKnown RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 LIPMQ5VYY2 423 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 RHBDF2Q6PJF5 856 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 OLFML1Q6UWY5 402 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 GPSM1Q86YR5 675 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 PLD3Q8IV08 490 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 DQX1Q8TE96 717 aaKnown RBP11.81□□□□□ -0.52
SYNPO-204ENST00000519664 SEPT3Q9UH03 358 aa11.81□□□□□ -0.52
SYNPO-204ENST00000519664 CCDC154A6NI56 674 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 TLR5O60602 858 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 PLIN3O60664 434 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 CTPS1P17812 591 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 HSPA13P48723 471 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 RALGDSQ12967 914 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 GRIK3Q13003 919 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 DCTN2Q13561 401 aaKnown RBP11.8□□□□□ -0.52
SYNPO-204ENST00000519664 ADRM1Q16186 407 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 LPCAT2Q7L5N7 544 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 PIWIL4Q7Z3Z4 852 aaKnown RBP11.8□□□□□ -0.52
SYNPO-204ENST00000519664 ZNF781Q8N8C0 355 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 MAGEE2Q8TD90 523 aaPredicted RBP11.8□□□□□ -0.52
SYNPO-204ENST00000519664 MCRS1Q96EZ8 462 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 FAXDC2Q96IV6 333 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 YME1L1Q96TA2 773 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 ZYG11BQ9C0D3 744 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 GLOD4Q9HC38 313 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 SH3BP4Q9P0V3 963 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 KLQ9UEF7 1012 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 PADI3Q9ULW8 664 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 ANKRD6Q9Y2G4 727 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 VWA7Q9Y334 891 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 NEMP2A6NFY4 417 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 BIRC5O15392 142 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 KLRC2P26717 231 aa11.8□□□□□ -0.52
SYNPO-204ENST00000519664 FLT3LGP49771 235 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms