RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 GNA12Q03113 381 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 SULT2A1Q06520 285 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 C2orf54Q08AI8 447 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 CALCOCO2Q13137 446 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 SLMAPQ14BN4 828 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 CCDC6Q16204 474 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 P3H1Q32P28 736 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 HNRNPA1L2Q32P51 320 aaKnown RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 PLK5Q496M5 336 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ACCSLQ4AC99 568 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 SLC45A4Q5BKX6 768 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 PPP6R3Q5H9R7 873 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 BEND6Q5SZJ8 279 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 C6orf118Q5T5N4 469 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 AFMIDQ63HM1 303 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 LAIR1Q6GTX8 287 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 TMCO3Q6UWJ1 677 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ZNF783Q6ZMS7 281 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 Q6ZVU0 165 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ARMCX6Q7L4S7 300 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 CROCCP2Q86T23 111 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 FAM124AQ86V42 546 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 NLRP14Q86W24 1093 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 RFX6Q8HWS3 928 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 CDKL3Q8IVW4 592 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 KLHL7Q8IXQ5 586 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 UMODL1-AS1Q8N2C9 162 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 STK40Q8N2I9 435 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 DEFB119Q8N690 84 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 DCAF4L2Q8NA75 395 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 LRRN4CLQ8ND94 238 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 OR2T3Q8NH03 318 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ART4Q93070 314 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 SIPA1Q96FS4 1042 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 KCTD15Q96SI1 283 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 SPON2Q9BUD6 331 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 C2orf49Q9BVC5 232 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 DUSP15Q9H1R2 295 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 USP29Q9HBJ7 922 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 EPB41L5Q9HCM4 733 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ATP13A1Q9HD20 1204 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 TMEM248Q9NWD8 314 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 PAK5Q9P286 719 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 MBD1Q9UIS9 605 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 GMEB2Q9UKD1 530 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 TRHDEQ9UKU6 1024 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 DNPEPQ9ULA0 475 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ZNF148Q9UQR1 794 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ACTL7AQ9Y615 435 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 CEP250Q9BV73 2442 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 KNL1Q8NG31 2342 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ZNF292O60281 2723 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 PLXNA2O75051 1894 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 CACNA1EQ15878 2313 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 IGHV1OR15-9A0A0B4J2B8 117 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 EDDM13A0A1B0GTR0 161 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ILVBLA1L0T0 632 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ERI2A8K979 691 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 K7ERQ8 282 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 EIF3HO15372 352 aaKnown RBP eCLIP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 TTI1O43156 1089 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 SMAD6O43541 496 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 OPHN1O60890 802 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 RAMP2O60895 175 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 STK10O94804 968 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 CD48P09326 243 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 RHOXF2BP0C7M4 288 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ACADMP11310 421 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 SRCP12931 536 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 TSHRP16473 764 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 GOT1P17174 413 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ERCC2P18074 760 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 CES1P23141 567 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ETFBP38117 255 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 NNMTP40261 264 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 PSMD8P48556 350 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 DHPSP49366 369 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 TPMTP51580 245 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 EIF3EP60228 445 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 RPS14P62263 151 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 VSNL1P62760 191 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 OTUD4Q01804 1114 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 RPL6Q02878 288 aaKnown RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ADCY2Q08462 1091 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 MORF4L2Q15014 288 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 PPP1R7Q15435 360 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 DLG2Q15700 870 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 C9orf64Q5T6V5 341 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ALS2CLQ60I27 953 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 PMS2CLQ68D20 193 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ZNF776Q68DI1 518 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-206ENST00000519115 IL31Q6EBC2 164 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 AADACL2Q6P093 401 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 TTC27Q6P3X3 843 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 LEKR1Q6ZMV7 388 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 HDXQ7Z353 690 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 ZNF354CQ86Y25 554 aa7.71□□□□□ -1.18
SDCBP-206ENST00000519115 MMAAQ8IVH4 418 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms