RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TUBGCP5Q96RT8 1024 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 PREBQ9HCU5 417 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 NUMA1Q14980 2115 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3DA0A087WVF3 549 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3IA0A087WXS9 549 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3EA0A087X179 549 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3KA0A087X1G2 549 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3FA6NER0 549 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3LB9A6J9 549 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 KHNYNO15037 678 aaKnown RBP22.27■■□□□ 1.16
VEGFA-217ENST00000518538 MUSKO15146 869 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 INSIG1O15503 277 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 KRT86O43790 486 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 CCDC175P0C221 793 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3HP0C7X1 549 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 ADRB3P13945 408 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 GNSP15586 552 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 CCNCP24863 283 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 CCR5P51681 352 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TFDP2Q14188 446 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 SF3A2Q15428 464 aaKnown RBP22.27■■□□□ 1.16
VEGFA-217ENST00000518538 MARC1Q5VT66 337 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3GQ6DHY5 549 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3CQ6IPX1 549 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 FBXL19Q6PCT2 694 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 PARS2Q7L3T8 475 aaKnown RBP22.27■■□□□ 1.16
VEGFA-217ENST00000518538 SRLQ86TD4 932 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 TBC1D3Q8IZP1 549 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-217ENST00000518538 C12orf50Q8NA57 414 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-217ENST00000518538 EIF2B4Q9UI10 523 aaKnown RBP22.27■■□□□ 1.16
VEGFA-217ENST00000518538 AMFRQ9UKV5 643 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 HEY1Q9Y5J3 304 aa22.27■■□□□ 1.16
VEGFA-217ENST00000518538 FAM186AA6NE01 2351 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 hCG_1818297A0A087WSY0 165 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 C16orf96A6NNT2 1141 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 PATE3B3GLJ2 98 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 MATN3O15232 486 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 CD27P26842 260 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 MMP13P45452 471 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 MAPK8P45983 427 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 DYNLT1P63172 113 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 LMNB2Q03252 620 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 HNRNPDQ14103 355 aaKnown RBP22.26■■□□□ 1.15
VEGFA-217ENST00000518538 PPP2R5EQ16537 467 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 TRIM61Q5EBN2 209 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 TCEAL6Q6IPX3 200 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 SLC23A3Q6PIS1 610 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 PEX26Q7Z412 305 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 TRIM69Q86WT6 500 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 CCDC50Q8IVM0 306 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 TEX26Q8N6G2 289 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 MAML1Q92585 1016 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 TCEAL3Q969E4 200 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 ZNF641Q96N77 438 aaPredicted RBP22.26■■□□□ 1.15
VEGFA-217ENST00000518538 MGME1Q9BQP7 344 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 MIR1-1HGQ9H1L0 117 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 DKK3Q9UBP4 350 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.26■■□□□ 1.15
VEGFA-217ENST00000518538 CAPN6Q9Y6Q1 641 aa22.26■■□□□ 1.15
VEGFA-217ENST00000518538 RIF1Q5UIP0 2472 aaKnown RBP22.25■■□□□ 1.15
VEGFA-217ENST00000518538 EP300Q09472 2414 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-217ENST00000518538 PIGNO95427 931 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 SERPINF2P08697 491 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 KRT10P13645 584 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 RWDD2BP57060 319 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 COPS2P61201 443 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 AP1S1P61966 158 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 PPP2CBP62714 309 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 PPP2CAP67775 309 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 PPIDQ08752 370 aaKnown RBP22.25■■□□□ 1.15
VEGFA-217ENST00000518538 KAZNQ674X7 775 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 NEK5Q6P3R8 708 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 ZNF662Q6ZS27 426 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 PGBD5Q8N414 524 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 C1orf216Q8TAB5 229 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 HCAR2Q8TDS4 363 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 RAB7BQ96AH8 199 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 OLFM3Q96PB7 478 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 NUSAP1Q9BXS6 441 aaKnown RBP22.25■■□□□ 1.15
VEGFA-217ENST00000518538 GUCA1BQ9UMX6 200 aa22.25■■□□□ 1.15
VEGFA-217ENST00000518538 RALGAPA1Q6GYQ0 2036 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 A0A1B0GTW7 788 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 A0A1W2PPC4 97 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 MIF4GDA9UHW6 222 aaKnown RBP22.24■■□□□ 1.15
VEGFA-217ENST00000518538 BCAT2O15382 392 aaPredicted RBP22.24■■□□□ 1.15
VEGFA-217ENST00000518538 LATO43561 262 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 AP1G1O43747 822 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 CST8O60676 142 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 CFIP05156 583 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 CR2P20023 1033 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 TGM2P21980 687 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 NR2C2P49116 596 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 PEX5P50542 639 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 SCNN1BP51168 640 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 PDK1Q15118 436 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 NPNTQ6UXI9 565 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 CCDC13Q8IYE1 715 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 ZCCHC9Q8N567 271 aaKnown RBP22.24■■□□□ 1.15
VEGFA-217ENST00000518538 CCNYQ8ND76 341 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 ORAI3Q9BRQ5 295 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms