RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SPON2Q9BUD6 331 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 COPG2Q9UBF2 871 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.82■■□□□ 1.88
COL13A1-210ENST00000517713 GJB3O75712 270 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 PPM1AP35813 382 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 SKIV2L2P42285 1042 aaKnown RBP26.82■■□□□ 1.88
COL13A1-210ENST00000517713 CSRP3P50461 194 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 ZNF177Q13360 481 aaPredicted RBP26.82■■□□□ 1.88
COL13A1-210ENST00000517713 USP10Q14694 798 aaKnown RBP26.82■■□□□ 1.88
COL13A1-210ENST00000517713 FBXO46Q6PJ61 603 aaPredicted RBP26.82■■□□□ 1.88
COL13A1-210ENST00000517713 CHST9Q7L1S5 443 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 TMEM150AQ86TG1 271 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 MTDHQ86UE4 582 aaKnown RBP26.82■■□□□ 1.88
COL13A1-210ENST00000517713 CRLF3Q8IUI8 442 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 C10orf107Q8IVU9 208 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 BBS5Q8N3I7 341 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 C20orf27Q9GZN8 174 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 MAFFQ9ULX9 164 aa26.82■■□□□ 1.88
COL13A1-210ENST00000517713 CHD5Q8TDI0 1954 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 CFAP73A6NFT4 308 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 TEX28O15482 410 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 KDELR3O43731 214 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 TSPAN3O60637 253 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 ATXN1LP0C7T5 689 aaKnown RBP26.81■■□□□ 1.88
COL13A1-210ENST00000517713 SLC1A2P43004 574 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 OXCT1P55809 520 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 TTC31Q49AM3 519 aaPredicted RBP26.81■■□□□ 1.88
COL13A1-210ENST00000517713 RAPH1Q70E73 1250 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 C2CD4AQ8NCU7 369 aaPredicted RBP26.81■■□□□ 1.88
COL13A1-210ENST00000517713 IFT43Q96FT9 208 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 DDX50Q9BQ39 737 aaKnown RBP26.81■■□□□ 1.88
COL13A1-210ENST00000517713 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.81■■□□□ 1.88
COL13A1-210ENST00000517713 PCDH10Q9P2E7 1040 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 ZFP69BQ9UJL9 534 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 TLK1Q9UKI8 766 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 ANKRD6Q9Y2G4 727 aa26.81■■□□□ 1.88
COL13A1-210ENST00000517713 ILVBLA1L0T0 632 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 PAPSS2O95340 614 aaPredicted RBP26.8■■□□□ 1.88
COL13A1-210ENST00000517713 RHOCP08134 193 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 MBL2P11226 248 aaPredicted RBP26.8■■□□□ 1.88
COL13A1-210ENST00000517713 POLD2P49005 469 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 ZNF470Q6ECI4 717 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 NEPROQ6NW34 567 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 SETD3Q86TU7 594 aaPredicted RBP26.8■■□□□ 1.88
COL13A1-210ENST00000517713 HERC6Q8IVU3 1022 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 ARMC5Q96C12 935 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 TXLNGQ9NUQ3 528 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 SMPD4Q9NXE4 827 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 HEY2Q9UBP5 337 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 UBA2Q9UBT2 640 aaPredicted RBP26.8■■□□□ 1.88
COL13A1-210ENST00000517713 SEPT3Q9UH03 358 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 ACTL7AQ9Y615 435 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 ANAPC1Q9H1A4 1944 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 A0A1B0GVM2 712 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 TCAF2A6NFQ2 919 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 RASSF9O75901 435 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 BAIAP3O94812 1187 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 UNC5CO95185 931 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 MYL2P10916 166 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 CPA3P15088 417 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 SAT1P21673 171 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 CDK18Q07002 472 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 SPDYAQ5MJ70 313 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 ALG1LQ6GMV1 187 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 ARID3BQ8IVW6 561 aaPredicted RBP26.8■■□□□ 1.88
COL13A1-210ENST00000517713 FEM1CQ96JP0 617 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 ZNF334Q9HCZ1 680 aaPredicted RBP26.8■■□□□ 1.88
COL13A1-210ENST00000517713 FBXO5Q9UKT4 447 aa26.8■■□□□ 1.88
COL13A1-210ENST00000517713 MROH6A6NGR9 719 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 ATP5HO75947 161 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 F11P03951 625 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 TAF1BQ53T94 588 aaPredicted RBP26.79■■□□□ 1.88
COL13A1-210ENST00000517713 OTOP2Q7RTS6 562 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 ITIH5Q86UX2 942 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 PACS2Q86VP3 889 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 SLC41A1Q8IVJ1 513 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 CYP2S1Q96SQ9 504 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 MGME1Q9BQP7 344 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 TRPC7Q9HCX4 862 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 KCNK4Q9NYG8 393 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 PCDHB12Q9Y5F1 795 aa26.79■■□□□ 1.88
COL13A1-210ENST00000517713 LILRB3O75022 631 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 SERPINE1P05121 402 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 GLDCP23378 1020 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 C16orf59Q7L2K0 433 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 GPR65Q8IYL9 337 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 TNS4Q8IZW8 715 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 CALML6Q8TD86 181 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 KLHL29Q96CT2 875 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 ZFRQ96KR1 1074 aaKnown RBP26.78■■□□□ 1.88
COL13A1-210ENST00000517713 CINPQ9BW66 212 aaPredicted RBP26.78■■□□□ 1.88
COL13A1-210ENST00000517713 TBC1D30Q9Y2I9 924 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 EPOP01588 193 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 SERPINF2P08697 491 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 SPATA31D3P0C874 917 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 HLA-DPA1P20036 260 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 GRK2P25098 689 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 CD151P48509 253 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 SLC1A6P48664 564 aa26.78■■□□□ 1.88
COL13A1-210ENST00000517713 SMAD3P84022 425 aaKnown RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms