RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 FOXB2Q5VYV0 432 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 EEF1DP3Q658K8 133 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 NOTUMQ6P988 496 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 GET4Q7L5D6 327 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 CUZD1Q86UP6 607 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 OLIG1Q8TAK6 271 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 DEFB129Q9H1M3 183 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ENTPD7Q9NQZ7 604 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF358Q9NW07 568 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MOCS1Q9NZB8 636 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 TJP2Q9UDY2 1190 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 CCDC154A6NI56 674 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 E5RI56 91 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 MFSD11O43934 449 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TOP3BO95985 862 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 GPIP06744 558 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CHRNGP07510 517 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 S100A1P23297 94 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 GRIA1P42261 906 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PLK1P53350 603 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 POLD3Q15054 466 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ATP6AP1LQ52LC2 224 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 FBXO47Q5MNV8 452 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CCDC81Q6ZN84 652 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PTF1AQ7RTS3 328 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CCDC103Q8IW40 242 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SVOPQ8N4V2 548 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF420Q8TAQ5 688 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ADAM32Q8TC27 787 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PHF12Q96QT6 1004 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ZFYVE28Q9HCC9 887 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ZBTB26Q9HCK0 441 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 DTLQ9NZJ0 730 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CNOT6Q9ULM6 557 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 RNF112Q9ULX5 631 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 DOLKQ9UPQ8 538 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 AQP12BA6NM10 295 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TK2O00142 265 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ARHGEF9O43307 516 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 BMP10O95393 424 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 MOCS2O96007 188 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 AMHP03971 560 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CNTN2Q02246 1040 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SULT2A1Q06520 285 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SNAPC2Q13487 334 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 LAMC2Q13753 1193 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 IKBKEQ14164 716 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CAPRIN1Q14444 709 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 GRM3Q14832 879 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CA9Q16790 459 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CCNYL2Q5T2Q4 361 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 FASTKD5Q7L8L6 764 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TAS1R3Q7RTX0 852 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 AQP12AQ8IXF9 295 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CENPLQ8N0S6 344 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 C12orf29Q8N999 325 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PHC3Q8NDX5 983 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SETD9Q8NE22 299 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 OR7A2PQ8NGA2 310 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ULK4Q96C45 1275 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 RTP4Q96DX8 246 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SYTL2Q9HCH5 934 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SLC17A6Q9P2U8 582 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SATB2Q9UPW6 733 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TPRKBQ9Y3C4 175 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TRAF6Q9Y4K3 522 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 KIAA1551Q9HCM1 1747 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 MYH11P35749 1972 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ADGRA2Q96PE1 1338 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 AP1G1O43747 822 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 RHOBTB1O94844 696 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SLC25A27O95847 323 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ALDOAP04075 364 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 HOXC6P09630 235 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CPB1P15086 417 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 L1CAMP32004 1257 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CPOXP36551 454 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CAPGP40121 348 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 GLUD2P49448 558 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 TKTL1P51854 596 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 AIF1P55008 147 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 RAD51Q06609 339 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 NDUFA5Q16718 116 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CERCAMQ5T4B2 595 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PGM2L1Q6PCE3 622 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 LRRC8DQ7L1W4 858 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 CLYBLQ8N0X4 340 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF567Q8N184 647 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF276Q8N554 614 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 WDTC1Q8N5D0 677 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 PQLC3Q8N755 202 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ITFG1Q8TB96 612 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 SLC2A14Q8TDB8 520 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 THUMPD3Q9BV44 507 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 MAF1Q9H063 256 aa6.72□□□□□ -1.33
CPNE3-203ENST00000517490 QTRT2Q9H974 415 aaKnown RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 GBA2Q9HCG7 927 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-203ENST00000517490 ARHGEF4Q9NR80 690 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms