RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 PTPN9P43378 593 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 NEK3P51956 506 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 PFN3P60673 137 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 E2F5Q15329 346 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 CARD16Q5EG05 197 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 PERM1Q5SV97 790 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 CDCP2Q5VXM1 449 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 CRTC1Q6UUV9 634 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 DNAJC14Q6Y2X3 702 aaPredicted RBP8.78□□□□□ -1
PABPC1-202ENST00000517403 Q6ZSR6 202 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 ARCQ7LC44 396 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 IQCHQ86VS3 1027 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 PHF13Q86YI8 300 aaPredicted RBP8.78□□□□□ -1
PABPC1-202ENST00000517403 FAM114A1Q8IWE2 563 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 ARHGAP12Q8IWW6 846 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 TP53I13Q8NBR0 393 aaPredicted RBP8.78□□□□□ -1
PABPC1-202ENST00000517403 ZNF548Q8NEK5 533 aaPredicted RBP8.78□□□□□ -1
PABPC1-202ENST00000517403 OR4C6Q8NH72 309 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 RFFLQ8WZ73 363 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 LRIG1Q96JA1 1093 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 FAM81BQ96LP2 452 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 MCEEQ96PE7 176 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 C1QTNF2Q9BXJ5 285 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 HDAC8Q9BY41 377 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 CLPBQ9H078 707 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 RRN3Q9NYV6 651 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 OR12D3Q9UGF7 316 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 SLC12A6Q9UHW9 1150 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 RABGEF1Q9UJ41 708 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 FZD10Q9ULW2 581 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 DMTF1Q9Y222 760 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 SCN8AQ9UQD0 1980 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 RP1P56715 2156 aa8.78□□□□□ -1
PABPC1-202ENST00000517403 BAHCC1Q9P281 2608 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 A0A0U1RQS6 177 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 TTC24A2A3L6 582 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 SOWAHDA6NJG2 315 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 C16orf96A6NNT2 1141 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 J3KR12 359 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 K7ESM1 405 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 BRINP1O60477 761 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 RHOQP17081 205 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 HNRNPA2B1P22626 353 aaKnown RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 ACP1P24666 158 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 L1CAMP32004 1257 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 NNMTP40261 264 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 EIF2S3P41091 472 aaKnown RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 DNA2P51530 1060 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 RALGDSQ12967 914 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 IHHQ14623 411 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 CYTH1Q15438 398 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 SETMARQ53H47 684 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 C6orf118Q5T5N4 469 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 FAM46CQ5VWP2 391 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 TXNRD3NBQ6F5E7 133 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 RWDD4Q6NW29 188 aaKnown RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 GUSBP11Q6P575 273 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 LYPD8Q6UX82 237 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 KYAT3Q6YP21 454 aaKnown RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 STRADAQ7RTN6 431 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 TMC6Q7Z403 805 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 IRF2BP2Q7Z5L9 587 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 PTAR1Q7Z6K3 402 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 PRPF39Q86UA1 669 aaKnown RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 TMPRSS12Q86WS5 348 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 CCDC117Q8IWD4 279 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 AOPEPQ8N6M6 819 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 PCDH20Q8N6Y1 951 aaKnown RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 RTL3Q8N8U3 475 aaKnown RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 DCBLD1Q8N8Z6 715 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 C3orf20Q8ND61 904 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 NTAN1Q96AB6 310 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 KLHDC7BQ96G42 594 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 CELF6Q96J87 481 aaKnown RBP8.77□□□□□ -1.01
PABPC1-202ENST00000517403 APOLD1Q96LR9 279 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 KLHL32Q96NJ5 620 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 SMIM14Q96QK8 99 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 ERGIC2Q96RQ1 377 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 HEPHQ9BQS7 1158 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 LRRC61Q9BV99 259 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 TTYH3Q9C0H2 523 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 OSBPL2Q9H1P3 480 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 PDCL3Q9H2J4 239 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 FKBPLQ9UIM3 349 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 PCDHGA1Q9Y5H4 931 aa8.77□□□□□ -1.01
PABPC1-202ENST00000517403 PTPRQQ9UMZ3 2332 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 SPTY2D1-AS1A0A0U1RR47 76 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 A6NNZ2 444 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 KRIT1O00522 736 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 BUB1BO60566 1050 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-202ENST00000517403 MMP20O60882 483 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 PCDH8O95206 1070 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 F9P00740 461 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 PRNPP04156 253 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 NME1P15531 152 aaKnown RBP8.76□□□□□ -1.01
PABPC1-202ENST00000517403 TIMP2P16035 220 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 CKMT2P17540 419 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 GPD1P21695 349 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 TGM2P21980 687 aa8.76□□□□□ -1.01
PABPC1-202ENST00000517403 IL1R2P27930 398 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms