RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 HALP42357 657 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KIR2DS2P43631 304 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RANGAP1P46060 587 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PPP3CCP48454 512 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 VPS41P49754 854 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EFNA5P52803 228 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HAP1P54257 671 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EPHB1P54762 984 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PSMC1P62191 440 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SUMO1P63165 101 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EGFEM1PQ0D2K5 195 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PMPCAQ10713 525 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TBL3Q12788 808 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 UNC119Q13432 240 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CLUL1Q15846 466 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KIAA1644Q3SXP7 199 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CHRFAM7AQ494W8 412 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LONRF3Q496Y0 759 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GLE1Q53GS7 698 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KRTCAP3Q53RY4 240 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TECRLQ5HYJ1 363 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ATAD3CQ5T2N8 411 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 XRRA1Q6P2D8 792 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KSR2Q6VAB6 950 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF841Q6ZN19 808 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 Q6ZSR9 355 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRABD2AQ86V40 505 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PALB2Q86YC2 1186 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HSCBQ8IWL3 235 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MYOCDQ8IZQ8 938 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM185AQ8N0U4 392 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ABHD12Q8N2K0 398 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF491Q8N8L2 437 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 Q8NBF4 154 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TMEM87AQ8NBN3 555 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SPATA22Q8NHS9 363 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 AFAP1L1Q8TED9 768 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC35F5Q8WV83 523 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZFAND2BQ8WV99 257 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KAT5Q92993 513 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRIM63Q969Q1 353 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MTFMTQ96DP5 389 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DNAJA3Q96EY1 480 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF419Q96HQ0 510 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 C17orf80Q9BSJ5 609 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 C16orf70Q9BSU1 422 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 WWTR1Q9GZV5 400 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IKZF5Q9H5V7 419 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CXorf36Q9H7Y0 433 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRIM45Q9H8W5 580 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 UPF2Q9HAU5 1272 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 USP29Q9HBJ7 922 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SAMSN1Q9NSI8 373 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GINM1Q9NU53 330 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ASNSD1Q9NWL6 643 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CFAP97Q9P2B7 532 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HESX1Q9UBX0 185 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MARCOQ9UEW3 520 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DRG1Q9Y295 367 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 INPP5FQ9Y2H2 1132 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF337Q9Y3M9 751 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NAALAD2Q9Y3Q0 740 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CAPN7Q9Y6W3 813 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CDC42BPBQ9Y5S2 1711 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MEGF6O75095 1541 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SHROOM3Q8TF72 1996 aa-0.7□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GPR179Q6PRD1 2367 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HIVEP3Q5T1R4 2406 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RBMY1BA6NDE4 496 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RBMY1EA6NEQ0 496 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 A8MVJ9 347 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RASA4BC9J798 803 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PDXKO00764 312 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PRYO14603 147 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CLIC2O15247 247 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MID1O15344 667 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PHF1O43189 567 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF861PO60384 105 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GJB3O75712 270 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DDAH1O94760 285 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NADKO95544 446 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 APBB3O95704 486 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 BCL10O95999 233 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IGHV4-39P01824 125 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MBPP02686 304 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ENO1P06733 434 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GJB1P08034 283 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MMP2P08253 660 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GNAI3P08754 354 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RBMY1DP0C7P1 496 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MYBP10242 640 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MYF5P13349 255 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ADRA1DP25100 572 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NDUFS1P28331 727 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LRPAP1P30533 357 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CSTF2P33240 577 aaKnown RBP eCLIP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GALNSP34059 522 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC16A2P36021 539 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ITGAEP38570 1179 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms