RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 AAGABQ6PD74 315 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 BAIAP2L2Q6UXY1 529 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF589Q86UQ0 364 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 LAS2Q8IYD9 372 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 PRR22Q8IZ63 422 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 FAM185AQ8N0U4 392 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF540Q8NDQ6 660 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 MRGPRDQ8TDS7 321 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 MTFMTQ96DP5 389 aaKnown RBP-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 GDF15Q99988 308 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 HES7Q9BYE0 225 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 CCSER1Q9C0I3 900 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 PANK3Q9H999 370 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 PRODH2Q9UF12 536 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 LIMA1Q9UHB6 759 aaKnown RBP-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 STEAP1Q9UHE8 339 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 EXO1Q9UQ84 846 aaKnown RBP-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 TMX2Q9Y320 296 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 PCDHA3Q9Y5H8 950 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 NLRC5Q86WI3 1866 aa-0.75□□□□□ -2.53
RNU6-539P-201ENST00000516665 A6NL46 340 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 C3orf70A6NLC5 250 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 HTRA2O43464 458 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 TMEM225BP0DP42 221 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 UNGP13051 313 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 MYF5P13349 255 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 GYS1P13807 737 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF44P15621 663 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 HTR7P34969 479 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 HALP42357 657 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 GPR3P46089 330 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 NEK4P51957 841 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 SCAND1P57086 179 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 SNRPD1P62314 119 aaKnown RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 KIF23Q02241 960 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 SART3Q15020 963 aaKnown RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 ATP13A4Q4VNC1 1196 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 KRTCAP3Q53RY4 240 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 TECRLQ5HYJ1 363 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 CELF3Q5SZQ8 465 aaKnown RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 CCDC25Q86WR0 208 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 MAML2Q8IZL2 1156 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 JMYQ8N9B5 988 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZSWIM2Q8NEG5 633 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 MIPOL1Q8TD10 442 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 RAPGEF4Q8WZA2 1011 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 APPBP2Q92624 585 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 ABHD14AQ9BUJ0 271 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 PATZ1Q9HBE1 687 aaKnown RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF71Q9NQZ8 489 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 NUDT4Q9NZJ9 180 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 SLC27A6Q9Y2P4 619 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 RAP2CQ9Y3L5 183 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 CHTOPQ9Y3Y2 248 aaKnown RBP-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 CDY1Q9Y6F8 540 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 COL15A1P39059 1388 aa-0.76□□□□□ -2.53
RNU6-539P-201ENST00000516665 TIPRLO75663 272 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 CNTN5O94779 1100 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 SLITRK3O94933 977 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 MYZAPP0CAP1 466 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZSCAN5DPP0CG00 497 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 MDKP21741 143 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 TGM2P21980 687 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 PIK3R1P27986 724 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 AXLP30530 894 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 DPP6P42658 865 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 COPAP53621 1224 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 ADORA2A-AS1P86434 159 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 CLUL1Q15846 466 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 EMC10Q5UCC4 262 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 CLEC9AQ6UXN8 241 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 BRD3OSQ6XYD6 125 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 Q6ZSR9 355 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 AADATQ8N5Z0 425 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 DPP10Q8N608 796 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 CELF5Q8N6W0 485 aaKnown RBP-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 MRAPQ8TCY5 172 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 GTF3AQ92664 365 aaKnown RBP-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 STARD4Q96DR4 205 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 GIMAP5Q96F15 307 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 CCDC113Q9H0I3 377 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 UPF2Q9HAU5 1272 aaKnown RBP-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 XPO5Q9HAV4 1204 aaKnown RBP eCLIP-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF446Q9NWS9 450 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 ADPRHL2Q9NX46 363 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 CHPF2Q9P2E5 772 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 SLC9A2Q9UBY0 812 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 MUTYHQ9UIF7 546 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 SLCO3A1Q9UIG8 710 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 ZNF229Q9UJW7 825 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 FBXO4Q9UKT5 387 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 PCDHA1Q9Y5I3 950 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 PTCH2Q9Y6C5 1203 aa-0.77□□□□□ -2.53
RNU6-539P-201ENST00000516665 COL11A1P12107 1806 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 PDS5AQ29RF7 1337 aaKnown RBP-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 STK36Q9NRP7 1315 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 A0A1W2PQ72 361 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 CCDC154A6NI56 674 aa-0.78□□□□□ -2.53
RNU6-539P-201ENST00000516665 SERPINE3A8MV23 424 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms