RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 GNLYP22749 145 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 KLRC2P26717 231 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 MTNR1AP48039 350 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 TLE2Q04725 743 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 EGR4Q05215 589 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 RPE65Q16518 533 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 RUNDC3AQ59EK9 446 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 CBWD5Q5RIA9 395 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 NCAPH2Q6IBW4 605 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 FAM180BQ6P0A1 224 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 SLC16A12Q6ZSM3 486 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 LRRTM4Q86VH4 590 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 WDR5BQ86VZ2 330 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 TMC8Q8IU68 726 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 SUGP1Q8IWZ8 645 aaKnown RBP3.45□□□□□ -1.86
HERC4-215ENST00000515753 FAM9BQ8IZU0 186 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 FBXL14Q8N1E6 418 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 TMEM57Q8N5G2 664 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 SCAIQ8N9R8 606 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 PCYOX1LQ8NBM8 494 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 NUDCD2Q8WVJ2 157 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 OIT3Q8WWZ8 545 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 NCSTNQ92542 709 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 RUBCNQ92622 972 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 MIB2Q96AX9 1013 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 MASTLQ96GX5 879 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 FAM84BQ96KN1 310 aaPredicted RBP3.45□□□□□ -1.86
HERC4-215ENST00000515753 SERINC2Q96SA4 455 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 PYM1Q9BRP8 204 aaKnown RBP3.45□□□□□ -1.86
HERC4-215ENST00000515753 ISCUQ9H1K1 167 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 UBN1Q9NPG3 1134 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 SMC4Q9NTJ3 1288 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 GRHL1Q9NZI5 618 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 SEL1LQ9UBV2 794 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 SLC45A1Q9Y2W3 748 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 PTPRGP23470 1445 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 KIF27Q86VH2 1401 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 RPS10-NUDT3A0A1W2PQS6 291 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 B9A039 149 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 F5H0A9 414 aaPredicted RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 SOX30O94993 753 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 CD4P01730 458 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 LCATP04180 440 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 IFIT1P09914 478 aaKnown RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 KCNJ4P48050 445 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 PAPOLAP51003 745 aaKnown RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 NAP1L1P55209 391 aaKnown RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 Q0VFX4 171 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 BYSLQ13895 437 aaKnown RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 NFATC4Q14934 902 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 TAF5Q15542 800 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 SYTL3Q4VX76 610 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 LRRC24Q50LG9 513 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 WASHC2DQ5SRD0 308 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 SPATA1Q5VX52 437 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 TMEM71Q6P5X7 295 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 KRT77Q7Z794 578 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 TMTC1Q8IUR5 882 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 FAM217AQ8IXS0 508 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 FTSJ3Q8IY81 847 aaKnown RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 GPATCH11Q8N954 259 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 LRRC57Q8N9N7 239 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 CSGALNACT1Q8TDX6 532 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 DNASE2BQ8WZ79 361 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 SH3KBP1Q96B97 665 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 MEIS3Q99687 375 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 NTPCRQ9BSD7 190 aaKnown RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 FAM167BQ9BTA0 163 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 SF3B5Q9BWJ5 86 aaKnown RBP3.44□□□□□ -1.86
HERC4-215ENST00000515753 JMJD4Q9H9V9 463 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 BLOC1S4Q9NUP1 217 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 DNAJC16Q9Y2G8 782 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 KIAA0586Q9BVV6 1533 aa3.44□□□□□ -1.86
HERC4-215ENST00000515753 PLB1Q6P1J6 1458 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 TNIKQ9UKE5 1360 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 CCDC196A0A1B0GTZ2 297 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 ANKRD18BA2A2Z9 1011 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 OR6C68A6NDL8 312 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 B4E171 279 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 HOXC11O43248 304 aaPredicted RBP3.43□□□□□ -1.86
HERC4-215ENST00000515753 HBP1O60381 514 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 KRT38O76015 456 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 YWHAQP27348 245 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 COPB2P35606 906 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 TSPAN7P41732 249 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 SKIV2L2P42285 1042 aaKnown RBP3.43□□□□□ -1.86
HERC4-215ENST00000515753 CLNS1AP54105 237 aaKnown RBP3.43□□□□□ -1.86
HERC4-215ENST00000515753 VAMP2P63027 116 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 ARHGAP8P85298 464 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 NUCB1Q02818 461 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 GOLGA8FQ08AF8 430 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 TOMM20Q15388 145 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 FAM133BQ5BKY9 247 aaKnown RBP3.43□□□□□ -1.86
HERC4-215ENST00000515753 ANKRD45Q5TZF3 282 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 DCAF12L2Q5VW00 463 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 TMEM268Q5VZI3 342 aa3.43□□□□□ -1.86
HERC4-215ENST00000515753 HEPHL1Q6MZM0 1159 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms