RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 PCSK9Q8NBP7 692 aaKnown RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 SLC2A14Q8TDB8 520 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CLEC4CQ8WTT0 213 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 C12orf42Q96LP6 360 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 KCTD15Q96SI1 283 aaPredicted RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 ADAM28Q9UKQ2 775 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 SQORQ9Y6N5 450 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 TADA2AO75478 443 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 PCNAP12004 261 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CDH2P19022 906 aaPredicted RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CCNA2P20248 432 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 BCAT1P54687 386 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 GNA12Q03113 381 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 DMPKQ09013 629 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 SPRYD7Q5W111 196 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 ABRAXAS1Q6UWZ7 409 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 TMEM26Q6ZUK4 368 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CHST15Q7LFX5 561 aaPredicted RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CANT1Q8WVQ1 401 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 C12orf43Q96C57 262 aaKnown RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 TEPSINQ96N21 525 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 GPATCH1Q9BRR8 931 aaKnown RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 ZDHHC2Q9UIJ5 367 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 VILLO15195 856 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 SLC5A2P31639 672 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 CDH17Q12864 832 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 MAP2K5Q13163 448 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 FSCN1Q16658 493 aaKnown RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 MGAT5BQ3V5L5 792 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 FAM91A1Q658Y4 838 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 TTC30AQ86WT1 665 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ZCCHC7Q8N3Z6 543 aaKnown RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 SMYD1Q8NB12 490 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 FAR2Q96K12 515 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 LPIN3Q9BQK8 851 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 BLOC1S6Q9UL45 172 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NDUFAF1Q9Y375 327 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NFASCO94856 1347 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NCF1BA6NI72 391 aaPredicted RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NCF1CA8MVU1 366 aaPredicted RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NCF1P14598 390 aaPredicted RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 UGT1A6P19224 532 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 UGT1A1P22309 533 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 UGT1A4P22310 534 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 RPL10P27635 214 aaKnown RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 UGT1A3P35503 534 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 UGT1A5P35504 534 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 CD151P48509 253 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 RAD23AP54725 363 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 CACNB2Q08289 660 aaPredicted RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 SPIDRQ14159 915 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 OGFOD2Q6N063 350 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NANOGNBQ7Z5D8 188 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ZNF276Q8N554 614 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 KCTD14Q9BQ13 255 aaPredicted RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ATAD3AQ9NVI7 634 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 CPSF3Q9UKF6 684 aaKnown RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 COPG1Q9Y678 874 aaKnown RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 HACD1B0YJ81 288 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 KPNA4O00629 521 aaPredicted RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NRP2O60462 931 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 CDK9P50750 372 aaKnown RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 CXCL17Q6UXB2 119 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 FSTL5Q8N475 847 aaPredicted RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 FNDC8Q8TC99 324 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 EDEM1Q92611 657 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 QKIQ96PU8 341 aaKnown RBP eCLIP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NDEL1Q9GZM8 345 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 BRD8Q9H0E9 1235 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 PLK2Q9NYY3 685 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ANKRD36CQ5JPF3 1778 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 PDE4DIPQ5VU43 2346 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 SUPT3HB4E1H0 165 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 PGK1P00558 417 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ATICP31939 592 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ARL2P36404 184 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ACADSBP45954 432 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 BST2Q10589 180 aaKnown RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 NOGQ13253 232 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 MFSD10Q14728 455 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 RBBP7Q16576 425 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 FAM110CQ1W6H9 321 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 CLEC6AQ6EIG7 209 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 OLFML1Q6UWY5 402 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 PLD3Q8IV08 490 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 ZNF567Q8N184 647 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 GAB3Q8WWW8 586 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 PABPC5Q96DU9 382 aaKnown RBP13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 GMEB1Q9Y692 573 aa13.73□□□□□ -0.21
SH3TC1-225ENST00000515682 A0A0G2JLL6 359 aaPredicted RBP13.72□□□□□ -0.21
SH3TC1-225ENST00000515682 PABPN1LA6NDY0 278 aaKnown RBP13.72□□□□□ -0.21
SH3TC1-225ENST00000515682 DENRO43583 198 aaKnown RBP13.72□□□□□ -0.21
SH3TC1-225ENST00000515682 MAN1A2O60476 641 aa13.72□□□□□ -0.21
SH3TC1-225ENST00000515682 DLGAP3O95886 979 aa13.72□□□□□ -0.21
SH3TC1-225ENST00000515682 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
SH3TC1-225ENST00000515682 MRPS15P82914 257 aaKnown RBP13.72□□□□□ -0.21
SH3TC1-225ENST00000515682 IKBKEQ14164 716 aa13.72□□□□□ -0.21
SH3TC1-225ENST00000515682 FRG1Q14331 258 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms