RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 ARHGEF26Q96DR7 871 aa18.68■□□□□ 0.58
SPOP-220ENST00000515508 TBATAQ96M53 351 aa18.68■□□□□ 0.58
SPOP-220ENST00000515508 BOCQ9BWV1 1114 aa18.68■□□□□ 0.58
SPOP-220ENST00000515508 OSBPL1AQ9BXW6 950 aa18.68■□□□□ 0.58
SPOP-220ENST00000515508 RAB6CQ9H0N0 254 aa18.68■□□□□ 0.58
SPOP-220ENST00000515508 MAGEH1Q9H213 219 aa18.68■□□□□ 0.58
SPOP-220ENST00000515508 IPO11Q9UI26 975 aaKnown RBP18.68■□□□□ 0.58
SPOP-220ENST00000515508 NOCTQ9UK39 431 aaKnown RBP18.68■□□□□ 0.58
SPOP-220ENST00000515508 SSUH2Q9Y2M2 353 aa18.68■□□□□ 0.58
SPOP-220ENST00000515508 RP1P56715 2156 aa18.68■□□□□ 0.58
SPOP-220ENST00000515508 A0A1W2PNU3 283 aaPredicted RBP18.67■□□□□ 0.58
SPOP-220ENST00000515508 FAM72CH0Y354 149 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 PLA2G2AP14555 144 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 MMP8P22894 467 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 ERCC5P28715 1186 aaPredicted RBP18.67■□□□□ 0.58
SPOP-220ENST00000515508 SNRPD1P62314 119 aaKnown RBP18.67■□□□□ 0.58
SPOP-220ENST00000515508 SKOR1P84550 965 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 RHDQ02161 417 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 POLD3Q15054 466 aaPredicted RBP18.67■□□□□ 0.58
SPOP-220ENST00000515508 DEFB133Q30KQ1 61 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 DPCR1Q3MIW9 517 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 FAM72AQ5TYM5 149 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 FAM72DQ6L9T8 149 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 EFL1Q7Z2Z2 1120 aaKnown RBP18.67■□□□□ 0.58
SPOP-220ENST00000515508 FAM72BQ86X60 149 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 RBFAQ8N0V3 343 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 RYBPQ8N488 228 aaPredicted RBP18.67■□□□□ 0.58
SPOP-220ENST00000515508 TPCN2Q8NHX9 752 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 LMX1AQ8TE12 382 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 SNRNP27Q8WVK2 155 aaKnown RBP18.67■□□□□ 0.58
SPOP-220ENST00000515508 WBP1Q96G27 269 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 VCPIP1Q96JH7 1222 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 IL12RB2Q99665 862 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 STK33Q9BYT3 514 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 DPH1Q9BZG8 443 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 CPNE5Q9HCH3 593 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 APOBEC3BQ9UH17 382 aaKnown RBP18.67■□□□□ 0.58
SPOP-220ENST00000515508 SATB2Q9UPW6 733 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 ENTPD2Q9Y5L3 495 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 COL6A6A6NMZ7 2263 aa18.67■□□□□ 0.58
SPOP-220ENST00000515508 CPED1A4D0V7 1026 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 KRIT1O00522 736 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 NEMP1O14524 444 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 TCEA3O75764 348 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 LRIG2O94898 1065 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 CYP1A1P04798 512 aaPredicted RBP18.66■□□□□ 0.58
SPOP-220ENST00000515508 UGT2B4P06133 528 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 SDC4P31431 198 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 IGFALSP35858 605 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 PTPN9P43378 593 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 CFHR1Q03591 330 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 PTK2BQ14289 1009 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 NR0B2Q15466 257 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 CDO1Q16878 200 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 C15orf59Q2T9L4 293 aaPredicted RBP18.66■□□□□ 0.58
SPOP-220ENST00000515508 CCDC14Q49A88 953 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 HSP90AA4PQ58FG1 418 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 C3orf38Q5JPI3 329 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 RWDD4Q6NW29 188 aaKnown RBP18.66■□□□□ 0.58
SPOP-220ENST00000515508 STRADAQ7RTN6 431 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 LRRC61Q9BV99 259 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 SPASTQ9UBP0 616 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 DNAI1Q9UI46 699 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 PNMA8BQ9ULN7 279 aaPredicted RBP18.66■□□□□ 0.58
SPOP-220ENST00000515508 HPCAL4Q9UM19 191 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 PCDHGA8Q9Y5G5 932 aa18.66■□□□□ 0.58
SPOP-220ENST00000515508 LRP4O75096 1905 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 CAPN8A6NHC0 703 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 C2CD4BA6NLJ0 364 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 LMO7DNF2Z398 122 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 RAMP2O60895 175 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 GCATO75600 419 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 ZIC2O95409 532 aaPredicted RBP18.65■□□□□ 0.58
SPOP-220ENST00000515508 POP4O95707 220 aaKnown RBP18.65■□□□□ 0.58
SPOP-220ENST00000515508 THOP1P52888 689 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 YPEL5P62699 121 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 MYLK3Q32MK0 819 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 PERM1Q5SV97 790 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 C6orf132Q5T0Z8 1188 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 RBM44Q6ZP01 1051 aaKnown RBP18.65■□□□□ 0.58
SPOP-220ENST00000515508 ZNF605Q86T29 641 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 SLC35F3Q8IY50 421 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 PHACTR4Q8IZ21 702 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 SLC20A1Q8WUM9 679 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 RXFP2Q8WXD0 754 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 CENPIQ92674 756 aaPredicted RBP18.65■□□□□ 0.58
SPOP-220ENST00000515508 NAT6Q93015 286 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 TBC1D31Q96DN5 1066 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 ATXN7L3BQ96GX2 97 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 PRR11Q96HE9 360 aaPredicted RBP18.65■□□□□ 0.58
SPOP-220ENST00000515508 KLHL32Q96NJ5 620 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 SLC46A1Q96NT5 459 aa18.65■□□□□ 0.58
SPOP-220ENST00000515508 TCEAL2Q9H3H9 227 aaPredicted RBP18.65■□□□□ 0.58
SPOP-220ENST00000515508 LRRK1Q38SD2 2015 aa18.64■□□□□ 0.58
SPOP-220ENST00000515508 KIF26BQ2KJY2 2108 aa18.64■□□□□ 0.57
SPOP-220ENST00000515508 ZSCAN5CA6NGD5 496 aaPredicted RBP18.64■□□□□ 0.57
SPOP-220ENST00000515508 PES1O00541 588 aaKnown RBP18.64■□□□□ 0.57
SPOP-220ENST00000515508 TOR1BO14657 336 aa18.64■□□□□ 0.57
SPOP-220ENST00000515508 KLK10O43240 276 aa18.64■□□□□ 0.57
SPOP-220ENST00000515508 KDELR3O43731 214 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms