RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NSUN2Q08J23 767 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLCN3-210ENST00000515420 KRT81Q14533 505 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 CYTH1Q15438 398 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF423Q2M1K9 1284 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 HLA-BQ31612 363 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 UAP1L1Q3KQV9 507 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 TMEM259Q4ZIN3 620 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 ATXN7L2Q5T6C5 722 aaPredicted RBP12.96□□□□□ -0.33
CLCN3-210ENST00000515420 LEKR1Q6ZMV7 388 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 PARS2Q7L3T8 475 aaKnown RBP12.96□□□□□ -0.33
CLCN3-210ENST00000515420 GAS2L3Q86XJ1 694 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 VSIG1Q86XK7 387 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 RYBPQ8N488 228 aaPredicted RBP12.96□□□□□ -0.33
CLCN3-210ENST00000515420 FAM174AQ8TBP5 190 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 SERAC1Q96JX3 654 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 SLC6A18Q96N87 628 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 PANX2Q96RD6 677 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 TUBGCP5Q96RT8 1024 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 SP110Q9HB58 689 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 LUC7LQ9NQ29 371 aaKnown RBP12.96□□□□□ -0.33
CLCN3-210ENST00000515420 AASDHPPTQ9NRN7 309 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 IPO11Q9UI26 975 aaKnown RBP12.96□□□□□ -0.33
CLCN3-210ENST00000515420 FADS3Q9Y5Q0 445 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 SPTBN2O15020 2390 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 TSPAN11A1L157 253 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 PRAMEF26H0Y7S4 382 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 DFFAO00273 331 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 YKT6O15498 198 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 TSPAN6O43657 245 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 PALMO75781 387 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 UGT2B4P06133 528 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 CD59P13987 128 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 FECHP22830 423 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 AMPD1P23109 780 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 IL4RP24394 825 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
CLCN3-210ENST00000515420 SLC1A1P43005 524 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 SSR1P43307 286 aaKnown RBP12.95□□□□□ -0.34
CLCN3-210ENST00000515420 NOVA1P51513 510 aaKnown RBP12.95□□□□□ -0.34
CLCN3-210ENST00000515420 HADHBP55084 474 aaKnown RBP12.95□□□□□ -0.34
CLCN3-210ENST00000515420 RPS21P63220 83 aaKnown RBP12.95□□□□□ -0.34
CLCN3-210ENST00000515420 DPYSL3Q14195 570 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 KIF19Q2TAC6 998 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 ZNF284Q2VY69 593 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 GDPD4Q6W3E5 623 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 DBX2Q6ZNG2 339 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 MFSD2AQ8NA29 543 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 TMEM145Q8NBT3 493 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 OR6K2Q8NGY2 324 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 ASB12Q8WXK4 309 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 FEM1CQ96JP0 617 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 ZNF641Q96N77 438 aaPredicted RBP12.95□□□□□ -0.34
CLCN3-210ENST00000515420 KLHL32Q96NJ5 620 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 TM7SF3Q9NS93 570 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 ETNK2Q9NVF9 386 aa12.95□□□□□ -0.34
CLCN3-210ENST00000515420 SHROOM3Q8TF72 1996 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 MED19A0JLT2 244 aaPredicted RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 AREL1O15033 823 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 PCDHGA12O60330 932 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 PCDH8O95206 1070 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 ADRB1P08588 477 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 HNRNPA2B1P22626 353 aaKnown RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 MAT2AP31153 395 aaKnown RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 CCT8P50990 548 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 TAS2R40P59535 323 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 SUZ12Q15022 739 aaKnown RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 PAFAH1B3Q15102 231 aaKnown RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 RALGPS1Q5JS13 557 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 LRRC38Q5VT99 294 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 BRAT1Q6PJG6 821 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 OXR1Q8N573 874 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 ATPAF2Q8N5M1 289 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 KCTD6Q8NC69 237 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 OR2I1PQ8NGU4 316 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 CINPQ9BW66 212 aaPredicted RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 ERVMER34-1Q9H9K5 563 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 SEPT3Q9UH03 358 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 ZFR2Q9UPR6 939 aaKnown RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 FNDC3AQ9Y2H6 1198 aaKnown RBP12.94□□□□□ -0.34
CLCN3-210ENST00000515420 SNX11Q9Y5W9 270 aa12.94□□□□□ -0.34
CLCN3-210ENST00000515420 A0A0A6YYK5 440 aaPredicted RBP12.93□□□□□ -0.34
CLCN3-210ENST00000515420 TLR4O00206 839 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 FLRT2O43155 660 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 MAFKO60675 156 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 WNT1P04628 370 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 CDC25BP30305 580 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 AKT2P31751 481 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 GKP32189 559 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 NXPH1P58417 271 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 AP1S1P61966 158 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 ELP6Q0PNE2 266 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 MESDQ14696 234 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 LBRQ14739 615 aaKnown RBP12.93□□□□□ -0.34
CLCN3-210ENST00000515420 STAT4Q14765 748 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 SPA17Q15506 151 aa12.93□□□□□ -0.34
CLCN3-210ENST00000515420 ANKRD20A8PQ5CZ79 823 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms