RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SLC25A27O95847 323 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CXCL8P10145 99 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ITGA2P17301 1181 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ALOX12P18054 663 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 GCAP28676 217 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC5A3P53794 718 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 VCPP55072 806 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP4F2P78329 520 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC25A11Q02978 314 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP4F3Q08477 520 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 MED21Q13503 144 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 WSCD2Q2TBF2 565 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF699Q32M78 642 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 LRRC38Q5VT99 294 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 IZUMO3Q5VZ72 239 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 DENND1BQ6P3S1 775 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 POTEHQ6S545 545 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 MAMDC4Q6UXC1 1216 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SPOCD1Q6ZMY3 1216 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 MRPL10Q7Z7H8 261 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CROCCP2Q86T23 111 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 RASSF3Q86WH2 238 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 THNSL1Q8IYQ7 743 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ADGRG5Q8IZF4 528 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 FITM2Q8N6M3 262 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 RASSF5Q8WWW0 418 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TBATAQ96M53 351 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SERPINB12Q96P63 405 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 OPALINQ96PE5 141 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 DEPDC7Q96QD5 511 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TWNKQ96RR1 684 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CINPQ9BW66 212 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF518BQ9C0D4 1074 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 C2orf40Q9H1Z8 148 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 RNPEPQ9H4A4 650 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 MCCC2Q9HCC0 563 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF212Q9UDV6 495 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 RPL26L1Q9UNX3 145 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TRPC5OSA6NMA1 111 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 H0Y858 1186 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 GPR25O00155 361 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 MYO1DO94832 1006 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 NFICP08651 508 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ZSCAN5DPP0CG00 497 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ETS1P14921 441 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 DNAJB2P25686 324 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CD86P42081 329 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CDKN2BP42772 138 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 NR4A2P43354 598 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 IREB2P48200 963 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 NUP107P57740 925 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 OSTNP61366 133 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TFAMQ00059 246 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 FOLH1Q04609 750 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CDC20Q12834 499 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ERO1BQ86YB8 467 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ZDHHC17Q8IUH5 632 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC22A9Q8IVM8 553 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 BBS7Q8IWZ6 715 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 RCOR2Q8IZ40 523 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CATSPER1Q8NEC5 780 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 JOSD2Q8TAC2 188 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 KBTBD7Q8WVZ9 684 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SPATA33Q96N06 139 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CITED4Q96RK1 184 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 MCMBPQ9BTE3 642 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 NFKBIZQ9BYH8 718 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TRIM55Q9BYV6 548 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 DPEP3Q9H4B8 488 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ACTR3BQ9P1U1 418 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ANGPTL2Q9UKU9 493 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ARL2BPQ9Y2Y0 163 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF638Q14966 1978 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 BTN3A1O00481 513 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CXCL11O14625 94 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ZBTB14O43829 449 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TBX10O75333 385 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SERPINI2O75830 405 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 KRT1P04264 644 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 CCNA2P20248 432 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 VAMP1P23763 118 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ACAT1P24752 427 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 IL1R2P27930 398 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 POU3F4P49335 361 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 OCA2Q04671 838 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 PRKCQQ04759 706 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 MPP2Q14168 576 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SURF1Q15526 300 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 FAM182AQ5T1J6 154 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 EFCAB12Q6NXP0 572 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 DNAJC24Q6P3W2 148 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 PAOXQ6QHF9 649 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 JAZF1Q86VZ6 243 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 PALM2Q8IXS6 379 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 PM20D2Q8IYS1 436 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ZCCHC9Q8N567 271 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TMEM35BQ8NCS4 154 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TRIM63Q969Q1 353 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 HS6ST2Q96MM7 605 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms