RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 PDZD7Q9H5P4 517 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 ARFGEF1Q9Y6D6 1849 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 SUPT3HB4E1H0 165 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 ATP5F1P24539 256 aaPredicted RBP14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 KCNK10P57789 538 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 CAPRIN1Q14444 709 aaKnown RBP14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 NEPROQ6NW34 567 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 TMCO5AQ8N6Q1 288 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 TMIGD2Q96BF3 282 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 TKTL2Q9H0I9 626 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 OR12D3Q9UGF7 316 aa14.03□□□□□ -0.16
TSPAN17-208ENST00000514705 MATN2O00339 956 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 NRP2O60462 931 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 RECQL4O94761 1208 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 PAN2Q504Q3 1202 aaKnown RBP14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 ZNF484Q5JVG2 852 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 SHCBP1Q8NEM2 672 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 TNIP2Q8NFZ5 429 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 RNF145Q96MT1 663 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 MID1IP1Q9NPA3 183 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 NDUFAF1Q9Y375 327 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 ERI2A8K979 691 aaKnown RBP14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 AP2A1O95782 977 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 PTPN1P18031 435 aaKnown RBP14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 PRKAA2P54646 552 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 HNRNPDQ14103 355 aaKnown RBP14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 SLC25A52Q3SY17 297 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 NOTUMQ6P988 496 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 SH2D5Q6ZV89 423 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 MAVSQ7Z434 540 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 OR9I1Q8NGQ6 314 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 RIN3Q8TB24 985 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 ZDHHC7Q9NXF8 308 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 NUDT5Q9UKK9 219 aa14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 HEMK1Q9Y5R4 338 aaPredicted RBP14.02□□□□□ -0.16
TSPAN17-208ENST00000514705 H3BRB1 525 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 PSMD3O43242 534 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 BCL10O95999 233 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 TFPTP0C1Z6 253 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 PTPN3P26045 913 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 PTPN9P43378 593 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 ENTPD1P49961 510 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 MYBPC3Q14896 1274 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 RBBP7Q16576 425 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 CNTD1Q8N815 330 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 TCF12Q99081 682 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 TUT1Q9H6E5 874 aaKnown RBP14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 TSC22D4Q9Y3Q8 395 aa14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 COL5A3P25940 1745 aaPredicted RBP14.02□□□□□ -0.17
TSPAN17-208ENST00000514705 DHRS12A0PJE2 317 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 CLIC3O95833 236 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 MT-CYBP00156 380 aaPredicted RBP14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 STT3AP46977 705 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 PITX1P78337 314 aaPredicted RBP14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 CDKL1Q00532 357 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 FRG1Q14331 258 aaKnown RBP14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 SV2CQ496J9 727 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 STXBP5Q5T5C0 1151 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 LBX2Q6XYB7 198 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 ANKRD23Q86SG2 305 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 NT5DC4Q86YG4 428 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 CANT1Q8WVQ1 401 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 TRHDEQ9UKU6 1024 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 ORC6Q9Y5N6 252 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 NCAM2O15394 837 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 ATG7O95352 703 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 RBP1P09455 135 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 SLC26A2P50443 739 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 MGAT5BQ3V5L5 792 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 BTBD8Q5XKL5 378 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 CUZD1Q86UP6 607 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 CROCCP3Q8IVE0 287 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 CCDC126Q96EE4 140 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 IFT43Q96FT9 208 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 SP110Q9HB58 689 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 FBXO5Q9UKT4 447 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 PHF24Q9UPV7 400 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 SOWAHBA6NEL2 793 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 CYP3A5P20815 502 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 CA8P35219 290 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 SQLEQ14534 574 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 DEFB115Q30KQ5 88 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 ESRP1Q6NXG1 681 aaKnown RBP14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 PGM2L1Q6PCE3 622 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 STRADAQ7RTN6 431 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 TBL1YQ9BQ87 522 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 FTHL17Q9BXU8 183 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 UNC93B1Q9H1C4 597 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 SELENONQ9NZV5 590 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 DLX3O60479 287 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 SNX2O60749 519 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 ARIH2O95376 493 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 NR4A1P22736 598 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 ICAM3P32942 547 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 TAS2R39P59534 338 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 MYBPC1Q00872 1141 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 FBXO48Q5FWF7 155 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 REP15Q6BDI9 236 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 SCIMPQ6UWF3 145 aa14.01□□□□□ -0.17
TSPAN17-208ENST00000514705 TMEM110Q86TL2 294 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms