RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ARL10Q8N8L6 244 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 RDH11Q8TC12 318 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 CERKQ8TCT0 537 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 COX4I2Q96KJ9 171 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 ZNF512Q96ME7 567 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-209ENST00000513761 RMI1Q9H9A7 625 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 VTA1Q9NP79 307 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 DNAJB4Q9UDY4 337 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 CRLS1Q9UJA2 301 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 TPRKBQ9Y3C4 175 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 TRAF6Q9Y4K3 522 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 RGPD1P0DJD0 1748 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 KDM3BQ7LBC6 1761 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 MYH7P12883 1935 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 TAF4O00268 1085 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 RECQL4O94761 1208 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 CKMT2P17540 419 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 IFNA8P32881 189 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 RECQLP46063 649 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-209ENST00000513761 PMF1Q6P1K2 205 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 SLC44A2Q8IWA5 706 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-209ENST00000513761 POC5Q8NA72 575 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 OR52B2Q96RD2 323 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 SMAD5Q99717 465 aaKnown RBP7.83□□□□□ -1.16
CLCN3-209ENST00000513761 HERPUD2Q9BSE4 406 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 PARVBQ9HBI1 364 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 XPNPEP1Q9NQW7 623 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 CNGB3Q9NQW8 809 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
CLCN3-209ENST00000513761 PRG3Q9Y2Y8 225 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-209ENST00000513761 ARFGEF2Q9Y6D5 1785 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 HNRNPCL2B2RXH8 293 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 TRIM24O15164 1050 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 IRF9Q00978 393 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 DDR2Q16832 855 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 VPS26BQ4G0F5 336 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ABHD15Q6UXT9 468 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 MILR1Q7Z6M3 343 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 STX19Q8N4C7 294 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 DDX1Q92499 740 aaKnown RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 TPD52L3Q96J77 140 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 RHOJQ9H4E5 214 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 RMND5AQ9H871 391 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ENTPD7Q9NQZ7 604 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 TAS2R13Q9NYV9 303 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 INVSQ9Y283 1065 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 RRN3P2A6NIE6 340 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 MED26O95402 600 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 OAS1P00973 400 aaKnown RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ODC1P11926 461 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SERPINH1P50454 418 aaKnown RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 KRR1Q13601 381 aaKnown RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SNX17Q15036 470 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SIX1Q15475 284 aaPredicted RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 TTC23Q5W5X9 447 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 HS6ST3Q8IZP7 471 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 OR2T34Q8NGX1 318 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 OR2T3Q8NH03 318 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 EMID1Q96A84 441 aaPredicted RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 GPBP1L1Q9HC44 474 aaPredicted RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 PDZK1P1A8MUH7 402 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 CNOT3O75175 753 aaKnown RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 CILPO75339 1184 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 PRIM2P49643 509 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 LIMK2P53671 638 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 MPP1Q00013 466 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 MAPRE1Q15691 268 aaKnown RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SPDYE7PQ495Y7 208 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 UGT3A1Q6NUS8 523 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ATP6V0D2Q8N8Y2 350 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ANKRD52Q8NB46 1076 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 OR56A4Q8NGH8 313 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 VPS9D1Q9Y2B5 631 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SPATA31C2B4DYI2 1134 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SEC22BO75396 215 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 H6PDO95479 791 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 PIRTP0C851 137 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ZNF37AP17032 561 aaPredicted RBP7.82□□□□□ -1.16
CLCN3-209ENST00000513761 RENBPP51606 427 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 MAXP61244 160 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 GRIK4Q16099 956 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 TIGD2Q4W5G0 525 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ARMCX4Q5H9R4 360 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 REP15Q6BDI9 236 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SLC27A1Q6PCB7 646 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SVOPQ8N4V2 548 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 CCDC185Q8N715 623 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 C1orf127Q8N9H9 656 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ACTR8Q9H981 624 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 USE1Q9NZ43 259 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SPASTQ9UBP0 616 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 U3KQV3 271 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 H3BNX3 289 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ASLP04424 464 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 CD86P42081 329 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 MATKP42679 507 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 OR1G1P47890 313 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 SEMA5AQ13591 1074 aa7.82□□□□□ -1.16
CLCN3-209ENST00000513761 ARHGEF7Q14155 803 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms