RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 UPK3BL2E5RIL1 263 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 KCNK3O14649 394 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 LCA5LO95447 670 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 CER1O95813 267 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 KRT7P08729 469 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 NUDT1P36639 197 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 ARHGAP25P42331 645 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 ABL2P42684 1182 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 CTSKP43235 329 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 RGRP47804 291 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 NOVA1P51513 510 aaKnown RBP17.98■□□□□ 0.47
DDR1-272ENST00000513243 RAD51Q06609 339 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 SLC14A1Q13336 389 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 TCEAL1Q15170 157 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 SETMARQ53H47 684 aaPredicted RBP17.98■□□□□ 0.47
DDR1-272ENST00000513243 SEL1L3Q68CR1 1132 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 PSAPL1Q6NUJ1 521 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 PIP4P1Q86T03 277 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 TSEN2Q8NCE0 465 aaKnown RBP17.98■□□□□ 0.47
DDR1-272ENST00000513243 DEFB124Q8NES8 71 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 PANX2Q96RD6 677 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 CALN1Q9BXU9 219 aa17.98■□□□□ 0.47
DDR1-272ENST00000513243 CPEB1Q9BZB8 566 aaKnown RBP17.98■□□□□ 0.47
DDR1-272ENST00000513243 KNL1Q8NG31 2342 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 SLC31A1O15431 190 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 AP1G1O43747 822 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 PRLRP16471 622 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 MAGEA1P43355 309 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 C21orf59P57076 290 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 RFTN1Q14699 578 aaPredicted RBP17.97■□□□□ 0.47
DDR1-272ENST00000513243 PDK2Q15119 407 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 TMEM259Q4ZIN3 620 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 CCDC170Q8IYT3 715 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 PCDH19Q8TAB3 1148 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 RAB7BQ96AH8 199 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 DKK3Q9UBP4 350 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 CA5BQ9Y2D0 317 aa17.97■□□□□ 0.47
DDR1-272ENST00000513243 CNOT1A5YKK6 2376 aaKnown RBP17.97■□□□□ 0.47
DDR1-272ENST00000513243 SPTBN2O15020 2390 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 DOCK9Q9BZ29 2069 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 PRAMEF26H0Y7S4 382 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 H0Y8X5 98 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 MUSKO15146 869 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 SPINT1O43278 529 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 BUB1BO60566 1050 aaPredicted RBP17.96■□□□□ 0.47
DDR1-272ENST00000513243 MAFKO60675 156 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 PIGNO95427 931 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 PEX11BO96011 259 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 ZNF883P0CG24 379 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 CEACAM1P13688 526 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 TIMP2P16035 220 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 FECHP22830 423 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 SERPINB6P35237 376 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 CSNK1DP48730 415 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 SLC10A7Q0GE19 358 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 ANKRD20A8PQ5CZ79 823 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 SRLQ86TD4 932 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 TTC7BQ86TV6 843 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 MFSD2AQ8NA29 543 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 TMEM145Q8NBT3 493 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 RAPGEF5Q92565 580 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 SKA1Q96BD8 255 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 ZNF599Q96NL3 588 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 ZNF670Q9BS34 389 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 CINPQ9BW66 212 aaPredicted RBP17.96■□□□□ 0.47
DDR1-272ENST00000513243 TM7SF3Q9NS93 570 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 GGT7Q9UJ14 662 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 ITM2BQ9Y287 266 aa17.96■□□□□ 0.47
DDR1-272ENST00000513243 TLR4O00206 839 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 AREL1O15033 823 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 SH3BP5O60239 455 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 ITIH2P19823 946 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 RPS21P63220 83 aaKnown RBP17.95■□□□□ 0.46
DDR1-272ENST00000513243 NSUN2Q08J23 767 aaKnown RBP eCLIP17.95■□□□□ 0.46
DDR1-272ENST00000513243 FGL2Q14314 439 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 LBRQ14739 615 aaKnown RBP17.95■□□□□ 0.46
DDR1-272ENST00000513243 STAT4Q14765 748 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 PAFAH1B3Q15102 231 aaKnown RBP17.95■□□□□ 0.46
DDR1-272ENST00000513243 ZNF423Q2M1K9 1284 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 SLC45A4Q5BKX6 768 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 LRRC73Q5JTD7 316 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 PRAMEF14Q5SWL7 426 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 ZFYVE27Q5T4F4 411 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 N4BP2L1Q5TBK1 243 aaPredicted RBP17.95■□□□□ 0.46
DDR1-272ENST00000513243 TMCO4Q5TGY1 634 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 NCBP2-AS2Q69YL0 99 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 KIAA1161Q6NSJ0 714 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 CAMK1DQ8IU85 385 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 MAP7D3Q8IWC1 876 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 FAF2Q96CS3 445 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 CAMK1GQ96NX5 476 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 PSKH2Q96QS6 385 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 MYOCQ99972 504 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 SLC32A1Q9H598 525 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 SUV39H2Q9H5I1 410 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 FZD3Q9NPG1 666 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 SEPT3Q9UH03 358 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 TFR2Q9UP52 801 aa17.95■□□□□ 0.46
DDR1-272ENST00000513243 PCDHA13Q9Y5I0 950 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms