RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 INO80DQ53TQ3 878 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-216ENST00000512683 C2CD6Q53TS8 623 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 LVRNQ6Q4G3 990 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 TRIM72Q6ZMU5 477 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 ZNF605Q86T29 641 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 ZNF548Q8NEK5 533 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-216ENST00000512683 CENPIQ92674 756 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-216ENST00000512683 ARHGEF2Q92974 986 aaKnown RBP12.77□□□□□ -0.37
VEGFA-216ENST00000512683 CENPTQ96BT3 561 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 SLC46A1Q96NT5 459 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 FZD3Q9NPG1 666 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 DKK3Q9UBP4 350 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 MFHAS1Q9Y4C4 1052 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 PCDHB1Q9Y5F3 818 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 U3KQA8 63 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 IGLON5A6NGN9 336 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 LMO7DNF2Z398 122 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 AREL1O15033 823 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 KDELR3O43731 214 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 MPOP05164 745 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 CHRNB2P17787 502 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 MMP8P22894 467 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 SDC4P31431 198 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 PTPN9P43378 593 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 YBEYP58557 167 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-216ENST00000512683 NOMO3P69849 1222 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 CFHR1Q03591 330 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 PDE1CQ14123 709 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-216ENST00000512683 GRM3Q14832 879 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 MANEALQ5VSG8 457 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 XKR5Q6UX68 686 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 RBM44Q6ZP01 1051 aaKnown RBP12.76□□□□□ -0.37
VEGFA-216ENST00000512683 PARS2Q7L3T8 475 aaKnown RBP12.76□□□□□ -0.37
VEGFA-216ENST00000512683 TTC7BQ86TV6 843 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 NLRP14Q86W24 1093 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 FAM131BQ86XD5 332 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 FSTL5Q8N475 847 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-216ENST00000512683 SLC20A1Q8WUM9 679 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 KCNE4Q8WWG9 221 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 SCG3Q8WXD2 468 aaKnown RBP12.76□□□□□ -0.37
VEGFA-216ENST00000512683 CPA5Q8WXQ8 436 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 CFAP57Q96MR6 1250 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 BOCQ9BWV1 1114 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 HSD3B7Q9H2F3 369 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 ASCL3Q9NQ33 180 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 FCF1Q9Y324 198 aaKnown RBP12.76□□□□□ -0.37
VEGFA-216ENST00000512683 SNX10Q9Y5X0 201 aa12.76□□□□□ -0.37
VEGFA-216ENST00000512683 RNF103O00237 685 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 RAD51BO15315 384 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 RAMP2O60895 175 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 TM7SF2O76062 418 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 GFPT2O94808 682 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 CYP1A1P04798 512 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 PLEKP08567 350 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 THOP1P52888 689 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 COPB1P53618 953 aaKnown RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 AIF1P55008 147 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 CXADRP78310 365 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 SKOR1P84550 965 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 VAC14Q08AM6 782 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 NCAPHQ15003 741 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 CCDC14Q49A88 953 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 ZNF542PQ5EBM4 170 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 NAA35Q5VZE5 725 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 ESRP1Q6NXG1 681 aaKnown RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 GDPD4Q6W3E5 623 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 APTXQ7Z2E3 356 aaKnown RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 DRC7Q8IY82 874 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 ZNF843Q8N446 348 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 ARL14Q8N4G2 192 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 OR6C4Q8NGE1 309 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 GCN1Q92616 2671 aaKnown RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 NTAN1Q96AB6 310 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 TBC1D31Q96DN5 1066 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 CPEB1Q9BZB8 566 aaKnown RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 SLC13A1Q9BZW2 595 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 ZDHHC6Q9H6R6 413 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 NLRC4Q9NPP4 1024 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 TMPRSS4Q9NRS4 437 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 FAM207AQ9NSI2 230 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 ANO10Q9NW15 660 aa12.75□□□□□ -0.37
VEGFA-216ENST00000512683 LIMA1Q9UHB6 759 aaKnown RBP12.75□□□□□ -0.37
VEGFA-216ENST00000512683 CPED1A4D0V7 1026 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 LRRC10BA6NIK2 292 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 C2CD4BA6NLJ0 364 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 GOLGA8SH3BPF8 625 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 C1QL1O75973 258 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 NEBLO76041 1014 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 ANXA6P08133 673 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 SOX5P35711 763 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 GSCP56915 257 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-216ENST00000512683 FMO1Q01740 532 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 CDR2Q01850 454 aa12.74□□□□□ -0.37
VEGFA-216ENST00000512683 EIF2B5Q13144 721 aaKnown RBP12.74□□□□□ -0.37
VEGFA-216ENST00000512683 EIF3IQ13347 325 aaKnown RBP12.74□□□□□ -0.37
VEGFA-216ENST00000512683 CDKN3Q16667 212 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms